Literature DB >> 19553670

Structure-function analysis of inositol hexakisphosphate-induced autoprocessing in Clostridium difficile toxin A.

Rory N Pruitt1, Benjamin Chagot, Michael Cover, Walter J Chazin, Ben Spiller, D Borden Lacy.   

Abstract

The action of Clostridium difficile toxins A and B depends on inactivation of host small G-proteins by glucosylation. Cellular inositol hexakisphosphate (InsP6) induces an autocatalytic cleavage of the toxins, releasing an N-terminal glucosyltransferase domain into the host cell cytosol. We have defined the cysteine protease domain (CPD) responsible for autoprocessing within toxin A (TcdA) and report the 1.6 A x-ray crystal structure of the domain bound to InsP6. InsP6 is bound in a highly basic pocket that is separated from an unusual active site by a beta-flap structure. Functional studies confirm an intramolecular mechanism of cleavage and highlight specific residues required for InsP6-induced TcdA processing. Analysis of the structural and functional data in the context of sequences from similar and diverse origins highlights a C-terminal extension and a pi-cation interaction within the beta-flap that appear to be unique among the large clostridial cytotoxins.

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Year:  2009        PMID: 19553670      PMCID: PMC2755918          DOI: 10.1074/jbc.M109.018929

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  29 in total

1.  Two-state allosteric behavior in a single-domain signaling protein.

Authors:  B F Volkman; D Lipson; D E Wemmer; D Kern
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Review 2.  Critical analysis of antibody catalysis.

Authors:  D Hilvert
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

3.  PHENIX: building new software for automated crystallographic structure determination.

Authors:  Paul D Adams; Ralf W Grosse-Kunstleve; Li Wei Hung; Thomas R Ioerger; Airlie J McCoy; Nigel W Moriarty; Randy J Read; James C Sacchettini; Nicholas K Sauter; Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

4.  The complete receptor-binding domain of Clostridium difficile toxin A is required for endocytosis.

Authors:  Cornelia Frisch; Ralf Gerhard; Klaus Aktories; Fred Hofmann; Ingo Just
Journal:  Biochem Biophys Res Commun       Date:  2003-01-17       Impact factor: 3.575

5.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

6.  Characterization of the cleavage site and function of resulting cleavage fragments after limited proteolysis of Clostridium difficile toxin B (TcdB) by host cells.

Authors:  Maja Rupnik; Stefan Pabst; Marjan Rupnik; Christoph von Eichel-Streiber; Henning Urlaub; Hans-Dieter Söling
Journal:  Microbiology (Reading)       Date:  2005-01       Impact factor: 2.777

7.  Stereochemical quality of protein structure coordinates.

Authors:  A L Morris; M W MacArthur; E G Hutchinson; J M Thornton
Journal:  Proteins       Date:  1992-04

8.  Low pH-induced formation of ion channels by clostridium difficile toxin B in target cells.

Authors:  H Barth; G Pfeifer; F Hofmann; E Maier; R Benz; K Aktories
Journal:  J Biol Chem       Date:  2001-01-04       Impact factor: 5.157

9.  pH-induced conformational changes in Clostridium difficile toxin B.

Authors:  M Qa'Dan; L M Spyres; J D Ballard
Journal:  Infect Immun       Date:  2000-05       Impact factor: 3.441

10.  Discovery of an allosteric site in the caspases.

Authors:  Jeanne A Hardy; Joni Lam; Jack T Nguyen; Tom O'Brien; James A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-16       Impact factor: 11.205

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  55 in total

Review 1.  Allosteric regulation of protease activity by small molecules.

Authors:  Aimee Shen
Journal:  Mol Biosyst       Date:  2010-06-10

2.  Autoproteolytic cleavage mediates cytotoxicity of Clostridium difficile toxin A.

Authors:  Isa Kreimeyer; Friederike Euler; Alexander Marckscheffel; Helma Tatge; Andreas Pich; Alexandra Olling; Janett Schwarz; Ingo Just; Ralf Gerhard
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2010-11-03       Impact factor: 3.000

3.  Structural organization of the functional domains of Clostridium difficile toxins A and B.

Authors:  Rory N Pruitt; Melissa G Chambers; Kenneth K-S Ng; Melanie D Ohi; D Borden Lacy
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-12       Impact factor: 11.205

4.  A small-molecule antivirulence agent for treating Clostridium difficile infection.

Authors:  Kristina Oresic Bender; Megan Garland; Jessica A Ferreyra; Andrew J Hryckowian; Matthew A Child; Aaron W Puri; David E Solow-Cordero; Steven K Higginbottom; Ehud Segal; Niaz Banaei; Aimee Shen; Justin L Sonnenburg; Matthew Bogyo
Journal:  Sci Transl Med       Date:  2015-09-23       Impact factor: 17.956

5.  Rational design of inhibitors and activity-based probes targeting Clostridium difficile virulence factor TcdB.

Authors:  Aaron W Puri; Patrick J Lupardus; Edgar Deu; Victoria E Albrow; K Christopher Garcia; Matthew Bogyo; Aimee Shen
Journal:  Chem Biol       Date:  2010-11-24

Review 6.  Clostridium difficile virulence factors: Insights into an anaerobic spore-forming pathogen.

Authors:  Milena M Awad; Priscilla A Johanesen; Glen P Carter; Edward Rose; Dena Lyras
Journal:  Gut Microbes       Date:  2014

7.  Crystal structure of Clostridium difficile toxin A.

Authors:  Nicole M Chumbler; Stacey A Rutherford; Zhifen Zhang; Melissa A Farrow; John P Lisher; Erik Farquhar; David P Giedroc; Benjamin W Spiller; Roman A Melnyk; D Borden Lacy
Journal:  Nat Microbiol       Date:  2016-01-11       Impact factor: 17.745

8.  Structure of a pathogen effector reveals the enzymatic mechanism of a novel acetyltransferase family.

Authors:  Zhi-Min Zhang; Ka-Wai Ma; Shuguang Yuan; Youfu Luo; Shushu Jiang; Eva Hawara; Songqin Pan; Wenbo Ma; Jikui Song
Journal:  Nat Struct Mol Biol       Date:  2016-08-15       Impact factor: 15.369

9.  The acetyltransferase activity of the bacterial toxin YopJ of Yersinia is activated by eukaryotic host cell inositol hexakisphosphate.

Authors:  Rohit Mittal; Sew Yeu Peak-Chew; Robert S Sade; Yvonne Vallis; Harvey T McMahon
Journal:  J Biol Chem       Date:  2010-04-29       Impact factor: 5.157

Review 10.  Inositol hexakisphosphate-induced autoprocessing of large bacterial protein toxins.

Authors:  Martina Egerer; Karla J F Satchell
Journal:  PLoS Pathog       Date:  2010-07-08       Impact factor: 6.823

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