Literature DB >> 10966475

Critical analysis of antibody catalysis.

D Hilvert1.   

Abstract

Antibody molecules elicited with rationally designed transition-state analogs catalyze numerous reactions, including many that cannot be achieved by standard chemical methods. Although relatively primitive when compared with natural enzymes, these catalysts are valuable tools for probing the origins and evolution of biological catalysis. Mechanistic and structural analyses of representative antibody catalysts, generated with a variety of strategies for several different reaction types, suggest that their modest efficiency is a consequence of imperfect hapten design and indirect selection. Development of improved transition-state analogs, refinements in immunization and screening protocols, and elaboration of general strategies for augmenting the efficiency of first-generation catalytic antibodies are identified as evident, but difficult, challenges for this field. Rising to these challenges and more successfully integrating programmable design with the selective forces of biology will enhance our understanding of enzymatic catalysis. Further, it should yield useful protein catalysts for an enhanced range of practical applications in chemistry and biology.

Mesh:

Substances:

Year:  2000        PMID: 10966475     DOI: 10.1146/annurev.biochem.69.1.751

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  54 in total

1.  Enzyme-like proteins by computational design.

Authors:  D N Bolon; S L Mayo
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-27       Impact factor: 11.205

Review 2.  De novo proteins from designed combinatorial libraries.

Authors:  Michael H Hecht; Aditi Das; Abigail Go; Luke H Bradley; Yinan Wei
Journal:  Protein Sci       Date:  2004-07       Impact factor: 6.725

Review 3.  What history tells us. XXVII. A new life for allostery.

Authors:  Michel Morange
Journal:  J Biosci       Date:  2012-03       Impact factor: 1.826

4.  Molecular imprint of enzyme active site by camel nanobodies: rapid and efficient approach to produce abzymes with alliinase activity.

Authors:  Jiang-Wei Li; Lijie Xia; Youhong Su; Hongchun Liu; Xueqing Xia; Qinxia Lu; Chunjin Yang; Kalbinur Reheman
Journal:  J Biol Chem       Date:  2012-02-28       Impact factor: 5.157

5.  An exciting but challenging road ahead for computational enzyme design.

Authors:  David Baker
Journal:  Protein Sci       Date:  2010-10       Impact factor: 6.725

6.  Local encoding of computationally designed enzyme activity.

Authors:  Malin Allert; Mary A Dwyer; Homme W Hellinga
Journal:  J Mol Biol       Date:  2006-12-05       Impact factor: 5.469

7.  New algorithms and an in silico benchmark for computational enzyme design.

Authors:  Alexandre Zanghellini; Lin Jiang; Andrew M Wollacott; Gong Cheng; Jens Meiler; Eric A Althoff; Daniela Röthlisberger; David Baker
Journal:  Protein Sci       Date:  2006-12       Impact factor: 6.725

Review 8.  Computer aided enzyme design and catalytic concepts.

Authors:  Maria P Frushicheva; Matthew J L Mills; Patrick Schopf; Manoj K Singh; Ram B Prasad; Arieh Warshel
Journal:  Curr Opin Chem Biol       Date:  2014-05-08       Impact factor: 8.822

9.  Incorporation of a single His residue by rational design enables thiol-ester hydrolysis by human glutathione transferase A1-1.

Authors:  Sofia Hederos; Kerstin S Broo; Emma Jakobsson; Gerard J Kleywegt; Bengt Mannervik; Lars Baltzer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-27       Impact factor: 11.205

10.  Fast, cheap and out of control--Insights into thermodynamic and informatic constraints on natural protein sequences from de novo protein design.

Authors:  Joseph M Brisendine; Ronald L Koder
Journal:  Biochim Biophys Acta       Date:  2015-10-20
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.