Literature DB >> 19535547

Variation in genomic recombination rates among heterogeneous stock mice.

Beth L Dumont1, Karl W Broman, Bret A Payseur.   

Abstract

We used a large panel of pedigreed, genetically admixed house mice to study patterns of recombination rate variation in a leading mammalian model system. We found considerable inter-individual differences in genomic recombination rates and documented a significant heritable component to this variation. These findings point to clear variation in recombination rate among common laboratory strains, a result that carries important implications for genetic analysis in the house mouse.

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Year:  2009        PMID: 19535547      PMCID: PMC2728871          DOI: 10.1534/genetics.109.105114

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  38 in total

1.  Genome-wide genetic association of complex traits in heterogeneous stock mice.

Authors:  William Valdar; Leah C Solberg; Dominique Gauguier; Stephanie Burnett; Paul Klenerman; William O Cookson; Martin S Taylor; J Nicholas P Rawlins; Richard Mott; Jonathan Flint
Journal:  Nat Genet       Date:  2006-07-09       Impact factor: 38.330

2.  Sequence variants in the RNF212 gene associate with genome-wide recombination rate.

Authors:  Augustine Kong; Gudmar Thorleifsson; Hreinn Stefansson; Gisli Masson; Agnar Helgason; Daniel F Gudbjartsson; Gudrun M Jonsdottir; Sigurjon A Gudjonsson; Sverrir Sverrisson; Theodora Thorlacius; Aslaug Jonasdottir; Gudmundur A Hardarson; Stefan T Palsson; Michael L Frigge; Jeffrey R Gulcher; Unnur Thorsteinsdottir; Kari Stefansson
Journal:  Science       Date:  2008-01-31       Impact factor: 47.728

3.  A pronounced sex difference in recombination values in the sixth chromosome of the house mouse.

Authors:  S A MALLYON
Journal:  Nature       Date:  1951-07-21       Impact factor: 49.962

4.  Sex, strain, and species differences affect recombination across an evolutionarily conserved segment of mouse chromosome 16.

Authors:  R H Reeves; M R Crowley; B F O'Hara; J D Gearhart
Journal:  Genomics       Date:  1990-09       Impact factor: 5.736

5.  Comprehensive human genetic maps: individual and sex-specific variation in recombination.

Authors:  K W Broman; J C Murray; V C Sheffield; R L White; J L Weber
Journal:  Am J Hum Genet       Date:  1998-09       Impact factor: 11.025

6.  Construction of multilocus genetic linkage maps in humans.

Authors:  E S Lander; P Green
Journal:  Proc Natl Acad Sci U S A       Date:  1987-04       Impact factor: 11.205

7.  Nucleotide variation in wild and inbred mice.

Authors:  Tovah Salcedo; Armando Geraldes; Michael W Nachman
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

8.  Recombination rate and reproductive success in humans.

Authors:  Augustine Kong; John Barnard; Daniel F Gudbjartsson; Gudmar Thorleifsson; Gudrun Jonsdottir; Sigrun Sigurdardottir; Bjorgvin Richardsson; Jonina Jonsdottir; Thorgeir Thorgeirsson; Michael L Frigge; Neil E Lamb; Stephanie Sherman; Jeffrey R Gulcher; Kari Stefansson
Journal:  Nat Genet       Date:  2004-10-03       Impact factor: 38.330

9.  A high-resolution single nucleotide polymorphism genetic map of the mouse genome.

Authors:  Sagiv Shifman; Jordana Tzenova Bell; Richard R Copley; Martin S Taylor; Robert W Williams; Richard Mott; Jonathan Flint
Journal:  PLoS Biol       Date:  2006-11       Impact factor: 8.029

10.  The recombinational anatomy of a mouse chromosome.

Authors:  Kenneth Paigen; Jin P Szatkiewicz; Kathryn Sawyer; Nicole Leahy; Emil D Parvanov; Siemon H S Ng; Joel H Graber; Karl W Broman; Petko M Petkov
Journal:  PLoS Genet       Date:  2008-07-11       Impact factor: 5.917

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  32 in total

1.  Genetic linkage map of a wild genome: genomic structure, recombination and sexual dimorphism in bighorn sheep.

Authors:  Jocelyn Poissant; John T Hogg; Corey S Davis; Joshua M Miller; Jillian F Maddox; David W Coltman
Journal:  BMC Genomics       Date:  2010-09-28       Impact factor: 3.969

2.  Evolution of the genomic recombination rate in murid rodents.

Authors:  Beth L Dumont; Bret A Payseur
Journal:  Genetics       Date:  2010-12-13       Impact factor: 4.562

3.  A new standard genetic map for the laboratory mouse.

Authors:  Allison Cox; Cheryl L Ackert-Bicknell; Beth L Dumont; Yueming Ding; Jordana Tzenova Bell; Gudrun A Brockmann; Jon E Wergedal; Carol Bult; Beverly Paigen; Jonathan Flint; Shirng-Wern Tsaih; Gary A Churchill; Karl W Broman
Journal:  Genetics       Date:  2009-06-17       Impact factor: 4.562

Review 4.  Recombination rate variation in closely related species.

Authors:  C S Smukowski; M A F Noor
Journal:  Heredity (Edinb)       Date:  2011-06-15       Impact factor: 3.821

5.  Substantial Heritable Variation in Recombination Rate on Multiple Scales in Honeybees and Bumblebees.

Authors:  Takeshi Kawakami; Andreas Wallberg; Anna Olsson; Dimitry Wintermantel; Joachim R de Miranda; Mike Allsopp; Maj Rundlöf; Matthew T Webster
Journal:  Genetics       Date:  2019-05-31       Impact factor: 4.562

Review 6.  Connecting theory and data to understand recombination rate evolution.

Authors:  Amy L Dapper; Bret A Payseur
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-12-19       Impact factor: 6.237

7.  Fine-scale heterogeneity in crossover rate in the garnet-scalloped region of the Drosophila melanogaster X chromosome.

Authors:  Nadia D Singh; Eric A Stone; Charles F Aquadro; Andrew G Clark
Journal:  Genetics       Date:  2013-02-14       Impact factor: 4.562

8.  Sex-specific recombination maps for individual macrochromosomes in the Japanese quail (Coturnix japonica).

Authors:  Lucía Del Priore; María Inés Pigozzi
Journal:  Chromosome Res       Date:  2015-01-18       Impact factor: 5.239

9.  Strong artificial selection in domestic mammals did not result in an increased recombination rate.

Authors:  Violeta Muñoz-Fuentes; Marina Marcet-Ortega; Gorka Alkorta-Aranburu; Catharina Linde Forsberg; Jane M Morrell; Esperanza Manzano-Piedras; Arne Söderberg; Katrin Daniel; Adrian Villalba; Attila Toth; Anna Di Rienzo; Ignasi Roig; Carles Vilà
Journal:  Mol Biol Evol       Date:  2014-11-19       Impact factor: 16.240

10.  Genetics of Genome-Wide Recombination Rate Evolution in Mice from an Isolated Island.

Authors:  Richard J Wang; Bret A Payseur
Journal:  Genetics       Date:  2017-06-02       Impact factor: 4.562

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