Literature DB >> 19523978

Accuracy of direct gradient sensing by cell-surface receptors.

Robert G Endres1, Ned S Wingreen.   

Abstract

Chemotactic cells of eukaryotic organisms are able to accurately sense shallow chemical concentration gradients using cell-surface receptors. This sensing ability is remarkable as cells must be able to spatially resolve small fractional differences in the numbers of particles randomly arriving at cell-surface receptors by diffusion. An additional challenge and source of uncertainty is that particles, once bound and released, may rebind the same or a different receptor, which adds to noise without providing any new information about the environment. We recently derived the fundamental physical limits of gradient sensing using a simple spherical-cell model, but not including explicit particle-receptor kinetics. Here, we use a method based on the fluctuation-dissipation theorem (FDT) to calculate the accuracy of gradient sensing by realistic receptors. We derive analytical results for two receptors, as well as two coaxial rings of receptors, e.g. one at each cell pole. For realistic receptors, we find that particle rebinding lowers the accuracy of gradient sensing, in line with our previous results.

Mesh:

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Year:  2009        PMID: 19523978     DOI: 10.1016/j.pbiomolbio.2009.06.002

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  15 in total

1.  Limits to the precision of gradient sensing with spatial communication and temporal integration.

Authors:  Andrew Mugler; Andre Levchenko; Ilya Nemenman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-20       Impact factor: 11.205

2.  Collective Chemotaxis through Noisy Multicellular Gradient Sensing.

Authors:  Julien Varennes; Bumsoo Han; Andrew Mugler
Journal:  Biophys J       Date:  2016-08-09       Impact factor: 4.033

3.  Quantifying information transmission in eukaryotic gradient sensing and chemotactic response.

Authors:  Bo Hu; Wen Chen; Herbert Levine; Wouter-Jan Rappel
Journal:  J Stat Phys       Date:  2011-04-01       Impact factor: 1.548

4.  How geometry and internal bias affect the accuracy of eukaryotic gradient sensing.

Authors:  Bo Hu; Wen Chen; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-02-28

5.  Concentration sensing in crowded environments.

Authors:  Wylie Stroberg; Santiago Schnell
Journal:  Biophys J       Date:  2021-03-04       Impact factor: 4.033

6.  Impact of receptor clustering on ligand binding.

Authors:  Bertrand R Caré; Hédi A Soula
Journal:  BMC Syst Biol       Date:  2011-03-31

Review 7.  A comparison of mathematical models for polarization of single eukaryotic cells in response to guided cues.

Authors:  Alexandra Jilkine; Leah Edelstein-Keshet
Journal:  PLoS Comput Biol       Date:  2011-04-28       Impact factor: 4.475

8.  Noise characteristics of the Escherichia coli rotary motor.

Authors:  Diana Clausznitzer; Robert G Endres
Journal:  BMC Syst Biol       Date:  2011-09-27

9.  Noise filtering tradeoffs in spatial gradient sensing and cell polarization response.

Authors:  Ching-Shan Chou; Lee Bardwell; Qing Nie; Tau-Mu Yi
Journal:  BMC Syst Biol       Date:  2011-12-13

10.  Chemotactic movement of a polarity site enables yeast cells to find their mates.

Authors:  Debraj Ghose; Katherine Jacobs; Samuel Ramirez; Timothy Elston; Daniel Lew
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-01       Impact factor: 11.205

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