Literature DB >> 19502442

Biochemical characterization of haloalkane dehalogenases DrbA and DmbC, Representatives of a Novel Subfamily.

Andrea Jesenská1, Marta Monincová, Tána Koudeláková, Khomaini Hasan, Radka Chaloupková, Zbynek Prokop, Arie Geerlof, Jirí Damborsky.   

Abstract

This study focuses on two representatives of experimentally uncharacterized haloalkane dehalogenases from the subfamily HLD-III. We report biochemical characterization of the expression products of haloalkane dehalogenase genes drbA from Rhodopirellula baltica SH1 and dmbC from Mycobacterium bovis 5033/66. The DrbA and DmbC enzymes show highly oligomeric structures and very low activities with typical substrates of haloalkane dehalogenases.

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Year:  2009        PMID： 19502442      PMCID： PMC2725514          DOI： 10.1128/AEM.00199-09

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  22 in total

Review 1.  Evolving haloalkane dehalogenases.

Authors:  Dick B Janssen
Journal:  Curr Opin Chem Biol       Date:  2004-04       Impact factor: 8.822

2.  Degradation of beta-Hexachlorocyclohexane by Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26.

Authors:  Yuji Nagata; Zbynek Prokop; Yukari Sato; Petr Jerabek; Ashwani Kumar; Yoshiyuki Ohtsubo; Masataka Tsuda; Jirí Damborsky
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

3.  Purification and characterization of a bacterial dehalogenase with activity toward halogenated alkanes, alcohols and ethers.

Authors:  D B Janssen; J Gerritse; J Brackman; C Kalk; D Jager; B Witholt
Journal:  Eur J Biochem       Date:  1988-01-15

4.  Purification and characterization of a haloalkane dehalogenase of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26.

Authors:  Y Nagata; K Miyauchi; J Damborsky; K Manova; A Ansorgova; M Takagi
Journal:  Appl Environ Microbiol       Date:  1997-09       Impact factor: 4.792

5.  Development of a fiber optic enzymatic biosensor for 1,2-dichloroethane.

Authors:  Derek W Campbell; Cord Müller; Kenneth F Reardon
Journal:  Biotechnol Lett       Date:  2006-05-31       Impact factor: 2.461

6.  Repositioning the catalytic triad aspartic acid of haloalkane dehalogenase: effects on stability, kinetics, and structure.

Authors:  G H Krooshof; E M Kwant; J Damborský; J Koca; D B Janssen
Journal:  Biochemistry       Date:  1997-08-05       Impact factor: 3.162

7.  Cloning and characterization of lin genes responsible for the degradation of Hexachlorocyclohexane isomers by Sphingomonas paucimobilis strain B90.

Authors:  Rekha Kumari; Sanjukta Subudhi; Mrutyunjay Suar; Gauri Dhingra; Vishakha Raina; Charu Dogra; Sukanya Lal; Jan Roelof van der Meer; Christof Holliger; Rup Lal
Journal:  Appl Environ Microbiol       Date:  2002-12       Impact factor: 4.792

8.  Enzymatic dehalogenation of gas phase substrates with haloalkane dehalogenase.

Authors:  B C Dravis; K E LeJeune; A D Hetro; A J Russell
Journal:  Biotechnol Bioeng       Date:  2000-08-05       Impact factor: 4.530

9.  Cloning and expression of the haloalkane dehalogenase gene dhmA from Mycobacterium avium N85 and preliminary characterization of DhmA.

Authors:  Andrea Jesenská; Milan Bartos; Vladimíra Czerneková; Ivan Rychlík; Ivo Pavlík; Jirí Damborský
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

10.  Comparative proteomic analysis of virulent Korean Mycobacterium tuberculosis K-strain with other mycobacteria strain following infection of U-937 macrophage.

Authors:  Sung Weon Ryoo; Young Kil Park; Sue-Nie Park; Young Soo Shim; Hyunjeong Liew; Seongman Kang; Gill-Han Bai
Journal:  J Microbiol       Date:  2007-06       Impact factor: 3.422
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  8 in total

1.  Biochemical characterization of a novel haloalkane dehalogenase from a cold-adapted bacterium.

Authors:  Ivana Drienovska; Eva Chovancova; Tana Koudelakova; Jiri Damborsky; Radka Chaloupkova
Journal:  Appl Environ Microbiol       Date:  2012-05-11       Impact factor: 4.792

2.  A Haloalkane Dehalogenase from Saccharomonospora viridis Strain DSM 43017, a Compost Bacterium with Unusual Catalytic Residues, Unique (S)-Enantiopreference, and High Thermostability.

Authors:  Klaudia Chmelova; Eva Sebestova; Veronika Liskova; Andy Beier; David Bednar; Zbynek Prokop; Radka Chaloupkova; Jiri Damborsky
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

3.  Biochemical characteristics of the novel haloalkane dehalogenase DatA, isolated from the plant pathogen Agrobacterium tumefaciens C58.

Authors:  Khomaini Hasan; Andrea Fortova; Tana Koudelakova; Radka Chaloupkova; Mayuko Ishitsuka; Yuji Nagata; Jiri Damborsky; Zbynek Prokop
Journal:  Appl Environ Microbiol       Date:  2010-12-30       Impact factor: 4.792

4.  Bioinformatic analyses of integral membrane transport proteins encoded within the genome of the planctomycetes species, Rhodopirellula baltica.

Authors:  Philipp Paparoditis; Ake Västermark; Andrew J Le; John A Fuerst; Milton H Saier
Journal:  Biochim Biophys Acta       Date:  2013-08-19

5.  Biochemical characterization of two haloalkane dehalogenases: DccA from Caulobacter crescentus and DsaA from Saccharomonospora azurea.

Authors:  Lauren Carlucci; Edward Zhou; Vladimir N Malashkevich; Steven C Almo; Emily C Mundorff
Journal:  Protein Sci       Date:  2016-02-21       Impact factor: 6.725

6.  Ylehd, an epoxide hydrolase with promiscuous haloalkane dehalogenase activity from tropical marine yeast Yarrowia lipolytica is induced upon xenobiotic stress.

Authors:  Chandrika Bendigiri; Smita Zinjarde; Ameeta RaviKumar
Journal:  Sci Rep       Date:  2017-09-19       Impact factor: 4.379

Review 7.  Marine-Derived Biocatalysts: Importance, Accessing, and Application in Aromatic Pollutant Bioremediation.

Authors:  Efstratios Nikolaivits; Maria Dimarogona; Nikolas Fokialakis; Evangelos Topakas
Journal:  Front Microbiol       Date:  2017-02-20       Impact factor: 5.640

8.  Biochemical characterization of a haloalkane dehalogenase DadB from Alcanivorax dieselolei B-5.

Authors:  Anzhang Li; Zongze Shao
Journal:  PLoS One       Date:  2014-02-28       Impact factor: 3.240
  8 in total

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