Literature DB >> 15812056

Degradation of beta-Hexachlorocyclohexane by Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26.

Yuji Nagata1, Zbynek Prokop, Yukari Sato, Petr Jerabek, Ashwani Kumar, Yoshiyuki Ohtsubo, Masataka Tsuda, Jirí Damborsky.   

Abstract

Beta-Hexachlorocyclohexane (beta-HCH) is the most recalcitrant among the alpha-, beta-, gamma-, and delta-isomers of HCH and causes serious environmental pollution problems. We demonstrate here that the haloalkane dehalogenase LinB, reported earlier to mediate the second step in the degradation of gamma-HCH in Sphingomonas paucimobilis UT26, metabolizes beta-HCH to produce 2,3,4,5,6-pentachlorocyclohexanol.

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Year:  2005        PMID： 15812056      PMCID： PMC1082558          DOI： 10.1128/AEM.71.4.2183-2185.2005

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  19 in total

1.  Reaction mechanism and stereochemistry of gamma-hexachlorocyclohexane dehydrochlorinase LinA.

Authors:  L Trantírek; K Hynková; Y Nagata; A Murzin; A Ansorgová; V Sklenár; J Damborský
Journal:  J Biol Chem       Date:  2000-11-30       Impact factor: 5.157

2.  Modification of activity and specificity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26 by engineering of its entrance tunnel.

Authors:  Radka Chaloupková; Jana Sýkorová; Zbynek Prokop; Andrea Jesenská; Marta Monincová; Martina Pavlová; Masataka Tsuda; Yuji Nagata; Jirí Damborský
Journal:  J Biol Chem       Date:  2003-10-02       Impact factor: 5.157

Review 3.  Evolving haloalkane dehalogenases.

Authors:  Dick B Janssen
Journal:  Curr Opin Chem Biol       Date:  2004-04       Impact factor: 8.822

4.  A correction in the nucleotide sequence of the Tn903 kanamycin resistance determinant in pUC4K.

Authors:  L A Taylor; R E Rose
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

5.  Construction and characterization of histidine-tagged haloalkane dehalogenase (LinB) of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26.

Authors:  Y Nagata; K Hynková; J Damborský; M Takagi
Journal:  Protein Expr Purif       Date:  1999-11       Impact factor: 1.650

6.  Purification and characterization of a haloalkane dehalogenase of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26.

Authors:  Y Nagata; K Miyauchi; J Damborsky; K Manova; A Ansorgova; M Takagi
Journal:  Appl Environ Microbiol       Date:  1997-09       Impact factor: 4.792

7.  Complete analysis of genes and enzymes for gamma-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26.

Authors:  Y Nagata; K Miyauchi; M Takagi
Journal:  J Ind Microbiol Biotechnol       Date:  1999-10       Impact factor: 3.346

8.  Cloning and characterization of lin genes responsible for the degradation of Hexachlorocyclohexane isomers by Sphingomonas paucimobilis strain B90.

Authors:  Rekha Kumari; Sanjukta Subudhi; Mrutyunjay Suar; Gauri Dhingra; Vishakha Raina; Charu Dogra; Sukanya Lal; Jan Roelof van der Meer; Christof Holliger; Rup Lal
Journal:  Appl Environ Microbiol       Date:  2002-12       Impact factor: 4.792

9.  Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates.

Authors:  Victor A Streltsov; Zbynek Prokop; Jirí Damborský; Yuji Nagata; Aaron Oakley; Matthew C J Wilce
Journal:  Biochemistry       Date:  2003-09-02       Impact factor: 3.162

10.  Catalytic mechanism of the maloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26.

Authors:  Zbynek Prokop; Marta Monincová; Radka Chaloupková; Martin Klvana; Yuji Nagata; Dick B Janssen; Jiri Damborský
Journal:  J Biol Chem       Date:  2003-09-01       Impact factor: 5.157
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  12 in total

1.  The enzymatic basis for pesticide bioremediation.

Authors:  Colin Scott; Gunjan Pandey; Carol J Hartley; Colin J Jackson; Matthew J Cheesman; Matthew C Taylor; Rinku Pandey; Jeevan L Khurana; Mark Teese; Chris W Coppin; Kahli M Weir; Rakesh K Jain; Rup Lal; Robyn J Russell; John G Oakeshott
Journal:  Indian J Microbiol       Date:  2008-05-01       Impact factor: 2.461

2.  A Haloalkane Dehalogenase from a Marine Microbial Consortium Possessing Exceptionally Broad Substrate Specificity.

Authors:  Tomas Buryska; Petra Babkova; Ondrej Vavra; Jiri Damborsky; Zbynek Prokop
Journal:  Appl Environ Microbiol       Date:  2018-01-02       Impact factor: 4.792

3.  Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation.

Authors:  Ryo Miyazaki; Yukari Sato; Michihiro Ito; Yoshiyuki Ohtsubo; Yuji Nagata; Masataka Tsuda
Journal:  Appl Environ Microbiol       Date:  2006-09-08       Impact factor: 4.792

4.  Haloalkane dehalogenase LinB is responsible for beta- and delta-hexachlorocyclohexane transformation in Sphingobium indicum B90A.

Authors:  Poonam Sharma; Vishakha Raina; Rekha Kumari; Shweta Malhotra; Charu Dogra; Hansi Kumari; Hans-Peter E Kohler; Hans-Rudolf Buser; Christof Holliger; Rup Lal
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

5.  Potency of Phlebia species of white rot fungi for the aerobic degradation, transformation and mineralization of lindane.

Authors:  Pengfei Xiao; Ryuichiro Kondo
Journal:  J Microbiol       Date:  2020-03-28       Impact factor: 3.422

6.  Discovery of Novel Haloalkane Dehalogenase Inhibitors.

Authors:  Tomas Buryska; Lukas Daniel; Antonin Kunka; Jan Brezovsky; Jiri Damborsky; Zbynek Prokop
Journal:  Appl Environ Microbiol       Date:  2016-01-15       Impact factor: 4.792

7.  Pseudomonas sp. to Sphingobium indicum: a journey of microbial degradation and bioremediation of Hexachlorocyclohexane.

Authors:  Rup Lal; Mandeep Dadhwal; Kirti Kumari; Pooja Sharma; Ajaib Singh; Hansi Kumari; Simran Jit; Sanjay Kumar Gupta; Aeshna Nigam; Devi Lal; Mansi Verma; Jaspreet Kaur; Kiran Bala; Swati Jindal
Journal:  Indian J Microbiol       Date:  2008-05-01       Impact factor: 2.461

8.  Evidence of α-, β- and γ-HCH mixture aerobic degradation by the native actinobacteria Streptomyces sp. M7.

Authors:  P E Sineli; G Tortella; J S Dávila Costa; C S Benimeli; S A Cuozzo
Journal:  World J Microbiol Biotechnol       Date:  2016-04-02       Impact factor: 3.312

9.  Biochemical characterization of haloalkane dehalogenases DrbA and DmbC, Representatives of a Novel Subfamily.

Authors:  Andrea Jesenská; Marta Monincová; Tána Koudeláková; Khomaini Hasan; Radka Chaloupková; Zbynek Prokop; Arie Geerlof; Jirí Damborsky
Journal:  Appl Environ Microbiol       Date:  2009-06-05       Impact factor: 4.792

10.  Crystal structure and site-directed mutagenesis analyses of haloalkane dehalogenase LinB from Sphingobium sp. strain MI1205.

Authors:  Masahiko Okai; Jun Ohtsuka; Lica Fabiana Imai; Tomoko Mase; Ryota Moriuchi; Masataka Tsuda; Koji Nagata; Yuji Nagata; Masaru Tanokura
Journal:  J Bacteriol       Date:  2013-04-05       Impact factor: 3.490
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