Literature DB >> 19487673

Yeast Rev1 protein promotes complex formation of DNA polymerase zeta with Pol32 subunit of DNA polymerase delta.

Narottam Acharya1, Robert E Johnson, Vincent Pagès, Louise Prakash, Satya Prakash.   

Abstract

Yeast DNA polymerase (Pol) delta, essential for DNA replication, is comprised of 3 subunits, Pol3, Pol31, and Pol32. Of these, the catalytic subunit Pol3 and the second subunit Pol31 are essential, whereas the Pol32 subunit is not essential for DNA replication. Although Pol32 is an integral component of Pol delta, it is also required for translesion synthesis (TLS) by Pol zeta. To begin to decipher the bases of Pol32 involvement in Pol zeta-mediated TLS, here we examine whether Pol32 physically interacts with Pol zeta or its associated proteins and provide evidence for the physical interaction of Pol32 with Rev1. Rev1 plays an indispensable structural role in Pol zeta-mediated TLS and it binds the Rev3 catalytic subunit of Pol zeta. Here, we show that although Pol32 does not directly bind Pol zeta, Pol32 can bind the Rev1-Pol zeta complex through its interaction with Rev1. We find that Pol32 binding has no stimulatory effect on DNA synthesis either by Rev1 in the Rev1-Pol32 complex or by Pol zeta in the Pol zeta-Rev1-Pol32 complex, irrespective of whether proliferating cell nuclear antigen has been loaded onto DNA or not. We discuss evidence for the biological significance of Rev1 binding to Pol32 for Pol zeta function in TLS and suggest a structural role for Rev1 in modulating the binding of Pol zeta with Pol32 in Pol delta stalled at a lesion site.

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Year:  2009        PMID: 19487673      PMCID: PMC2701015          DOI: 10.1073/pnas.0902175106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  Roles of yeast DNA polymerases delta and zeta and of Rev1 in the bypass of abasic sites.

Authors:  L Haracska; I Unk; R E Johnson; E Johansson; P M Burgers; S Prakash; L Prakash
Journal:  Genes Dev       Date:  2001-04-15       Impact factor: 11.361

2.  Role of DNA polymerase eta in the bypass of a (6-4) TT photoproduct.

Authors:  R E Johnson; L Haracska; S Prakash; L Prakash
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

3.  Eukaryotic polymerases iota and zeta act sequentially to bypass DNA lesions.

Authors:  R E Johnson; M T Washington; L Haracska; S Prakash; L Prakash
Journal:  Nature       Date:  2000-08-31       Impact factor: 49.962

4.  Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase eta.

Authors:  L Haracska; S L Yu; R E Johnson; L Prakash; S Prakash
Journal:  Nat Genet       Date:  2000-08       Impact factor: 38.330

5.  Hoogsteen base pair formation promotes synthesis opposite the 1,N6-ethenodeoxyadenosine lesion by human DNA polymerase iota.

Authors:  Deepak T Nair; Robert E Johnson; Louise Prakash; Satya Prakash; Aneel K Aggarwal
Journal:  Nat Struct Mol Biol       Date:  2006-07-02       Impact factor: 15.369

6.  Fidelity of human DNA polymerase eta.

Authors:  R E Johnson; M T Washington; S Prakash; L Prakash
Journal:  J Biol Chem       Date:  2000-03-17       Impact factor: 5.157

7.  Interaction with PCNA is essential for yeast DNA polymerase eta function.

Authors:  L Haracska; C M Kondratick; I Unk; S Prakash; L Prakash
Journal:  Mol Cell       Date:  2001-08       Impact factor: 17.970

8.  Translesion DNA synthesis by yeast DNA polymerase eta on templates containing N2-guanine adducts of 1,3-butadiene metabolites.

Authors:  I G Minko; M T Washington; L Prakash; S Prakash; R S Lloyd
Journal:  J Biol Chem       Date:  2000-11-02       Impact factor: 5.157

9.  Physical and functional interactions of human DNA polymerase eta with PCNA.

Authors:  L Haracska; R E Johnson; I Unk; B Phillips; J Hurwitz; L Prakash; S Prakash
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

10.  Efficient translesion replication past oxaliplatin and cisplatin GpG adducts by human DNA polymerase eta.

Authors:  A Vaisman; C Masutani; F Hanaoka; S G Chaney
Journal:  Biochemistry       Date:  2000-04-25       Impact factor: 3.162

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  29 in total

1.  DNA polymerase δ and ζ switch by sharing accessory subunits of DNA polymerase δ.

Authors:  Andrey G Baranovskiy; Artem G Lada; Hollie M Siebler; Yinbo Zhang; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2012-03-30       Impact factor: 5.157

2.  Pol31 and Pol32 subunits of yeast DNA polymerase δ are also essential subunits of DNA polymerase ζ.

Authors:  Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

Review 3.  Modulation of mutagenesis in eukaryotes by DNA replication fork dynamics and quality of nucleotide pools.

Authors:  Irina S-R Waisertreiger; Victoria G Liston; Miriam R Menezes; Hyun-Min Kim; Kirill S Lobachev; Elena I Stepchenkova; Tahir H Tahirov; Igor B Rogozin; Youri I Pavlov
Journal:  Environ Mol Mutagen       Date:  2012-10-10       Impact factor: 3.216

Review 4.  Translesion DNA synthesis and mutagenesis in eukaryotes.

Authors:  Julian E Sale
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

Review 5.  DNA repair mechanisms and the bypass of DNA damage in Saccharomyces cerevisiae.

Authors:  Serge Boiteux; Sue Jinks-Robertson
Journal:  Genetics       Date:  2013-04       Impact factor: 4.562

6.  Sml1 Inhibits the DNA Repair Activity of Rev1 in Saccharomyces cerevisiae during Oxidative Stress.

Authors:  Rui Yao; Pei Zhou; Chengjin Wu; Liming Liu; Jing Wu
Journal:  Appl Environ Microbiol       Date:  2020-03-18       Impact factor: 4.792

7.  Interaction between the Rev1 C-Terminal Domain and the PolD3 Subunit of Polζ Suggests a Mechanism of Polymerase Exchange upon Rev1/Polζ-Dependent Translesion Synthesis.

Authors:  Yulia Pustovalova; Mariana T Q Magalhães; Sanjay D'Souza; Alessandro A Rizzo; George Korza; Graham C Walker; Dmitry M Korzhnev
Journal:  Biochemistry       Date:  2016-03-24       Impact factor: 3.162

8.  A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae.

Authors:  Hollie M Siebler; Artem G Lada; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2014-05-10

9.  Roles of Rev1, Pol zeta, Pol32 and Pol eta in the bypass of chromosomal abasic sites in Saccharomyces cerevisiae.

Authors:  Paul A Auerbach; Bruce Demple
Journal:  Mutagenesis       Date:  2009-11-09       Impact factor: 3.000

Review 10.  REV1 and DNA polymerase zeta in DNA interstrand crosslink repair.

Authors:  Shilpy Sharma; Christine E Canman
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

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