Literature DB >> 19901007

Roles of Rev1, Pol zeta, Pol32 and Pol eta in the bypass of chromosomal abasic sites in Saccharomyces cerevisiae.

Paul A Auerbach1, Bruce Demple.   

Abstract

Translesion synthesis (TLS) on DNA is a process by which potentially cytotoxic replication-blocking lesions are bypassed, but at the risk of increased mutagenesis. The exact in vivo role of the individual TLS enzymes in Saccharomyces cerevisiae has been difficult to determine from previous studies due to differing results from the variety of systems used. We have generated a series of S.cerevisiae strains in which each of the TLS-related genes REV1, REV3, REV7, RAD30 and POL32 was deleted, and in which chromosomal apyrimidinic sites were generated during normal cell growth by the activity of altered forms of human uracil-DNA glycosylase that remove undamaged cytosines or thymines. Deletion of REV1, REV3 or REV7 resulted in slower growth dependent on (rev3Delta and rev7Delta) or enhanced by (rev1Delta) expression of the mutator glycosylases and a nearly complete abolition of glycosylase-induced mutagenesis. Deletion of POL32 resulted in cell death when the mutator glycosylases were expressed and, in their absence, diminished spontaneous mutagenesis. RAD30 appeared to be unnecessary for mutagenesis in response to abasic sites, as deleting this gene caused no significant change in either the mutation rates or the mutational spectra due to glycosylase expression.

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Year:  2009        PMID: 19901007      PMCID: PMC2796187          DOI: 10.1093/mutage/gep045

Source DB:  PubMed          Journal:  Mutagenesis        ISSN: 0267-8357            Impact factor:   3.000


  49 in total

1.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

2.  Roles of yeast DNA polymerases delta and zeta and of Rev1 in the bypass of abasic sites.

Authors:  L Haracska; I Unk; R E Johnson; E Johansson; P M Burgers; S Prakash; L Prakash
Journal:  Genes Dev       Date:  2001-04-15       Impact factor: 11.361

3.  Pol32 is required for Pol zeta-dependent translesion synthesis and prevents double-strand breaks at the replication fork.

Authors:  Michelle Hanna; Lindsay G Ball; Amy H Tong; Charles Boone; Wei Xiao
Journal:  Mutat Res       Date:  2007-06-28       Impact factor: 2.433

4.  The Saccharomyces cerevisiae RAD30 gene, a homologue of Escherichia coli dinB and umuC, is DNA damage inducible and functions in a novel error-free postreplication repair mechanism.

Authors:  J P McDonald; A S Levine; R Woodgate
Journal:  Genetics       Date:  1997-12       Impact factor: 4.562

5.  The relative roles in vivo of Saccharomyces cerevisiae Pol eta, Pol zeta, Rev1 protein and Pol32 in the bypass and mutation induction of an abasic site, T-T (6-4) photoadduct and T-T cis-syn cyclobutane dimer.

Authors:  Peter E M Gibbs; John McDonald; Roger Woodgate; Christopher W Lawrence
Journal:  Genetics       Date:  2004-11-01       Impact factor: 4.562

6.  Mutagenic specificity of endogenously generated abasic sites in Saccharomyces cerevisiae chromosomal DNA.

Authors:  Paul Auerbach; Richard A O Bennett; Elisabeth A Bailey; Hans E Krokan; Bruce Demple
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-28       Impact factor: 11.205

7.  Complex formation of yeast Rev1 and Rev7 proteins: a novel role for the polymerase-associated domain.

Authors:  Narottam Acharya; Lajos Haracska; Robert E Johnson; Ildiko Unk; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

8.  Identification of APN2, the Saccharomyces cerevisiae homolog of the major human AP endonuclease HAP1, and its role in the repair of abasic sites.

Authors:  R E Johnson; C A Torres-Ramos; T Izumi; S Mitra; S Prakash; L Prakash
Journal:  Genes Dev       Date:  1998-10-01       Impact factor: 11.361

Review 9.  Abasic sites in DNA: repair and biological consequences in Saccharomyces cerevisiae.

Authors:  Serge Boiteux; Marie Guillet
Journal:  DNA Repair (Amst)       Date:  2004-01-05

10.  Characterization of the two small subunits of Saccharomyces cerevisiae DNA polymerase delta.

Authors:  K J Gerik; X Li; A Pautz; P M Burgers
Journal:  J Biol Chem       Date:  1998-07-31       Impact factor: 5.157

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  15 in total

1.  Mutation signatures specific to DNA alkylating agents in yeast and cancers.

Authors:  Natalie Saini; Joan F Sterling; Cynthia J Sakofsky; Camille K Giacobone; Leszek J Klimczak; Adam B Burkholder; Ewa P Malc; Piotr A Mieczkowski; Dmitry A Gordenin
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971

Review 2.  DNA repair mechanisms and the bypass of DNA damage in Saccharomyces cerevisiae.

Authors:  Serge Boiteux; Sue Jinks-Robertson
Journal:  Genetics       Date:  2013-04       Impact factor: 4.562

3.  Structural insights into the assembly of human translesion polymerase complexes.

Authors:  Wei Xie; Xuan Yang; Min Xu; Tao Jiang
Journal:  Protein Cell       Date:  2012-11-10       Impact factor: 14.870

Review 4.  Eukaryotic DNA polymerase ζ.

Authors:  Alena V Makarova; Peter M Burgers
Journal:  DNA Repair (Amst)       Date:  2015-02-19

5.  Translesion synthesis across abasic lesions by human B-family and Y-family DNA polymerases α, δ, η, ι, κ, and REV1.

Authors:  Jeong-Yun Choi; Seonhee Lim; Eun-Jin Kim; Ara Jo; F Peter Guengerich
Journal:  J Mol Biol       Date:  2010-10-01       Impact factor: 5.469

6.  The dCMP transferase activity of yeast Rev1 is biologically relevant during the bypass of endogenously generated AP sites.

Authors:  Nayun Kim; Sarah V Mudrak; Sue Jinks-Robertson
Journal:  DNA Repair (Amst)       Date:  2011-10-22

7.  A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae.

Authors:  Hollie M Siebler; Artem G Lada; Andrey G Baranovskiy; Tahir H Tahirov; Youri I Pavlov
Journal:  DNA Repair (Amst)       Date:  2014-05-10

Review 8.  DNA polymerase delta in DNA replication and genome maintenance.

Authors:  Marc J Prindle; Lawrence A Loeb
Journal:  Environ Mol Mutagen       Date:  2012-10-13       Impact factor: 3.216

9.  The choice of nucleotide inserted opposite abasic sites formed within chromosomal DNA reveals the polymerase activities participating in translesion DNA synthesis.

Authors:  Kin Chan; Michael A Resnick; Dmitry A Gordenin
Journal:  DNA Repair (Amst)       Date:  2013-08-26

10.  Loss of Pol32 in Drosophila melanogaster causes chromosome instability and suppresses variegation.

Authors:  Patrizia Tritto; Valeria Palumbo; Lucia Micale; Marco Marzulli; Maria Pia Bozzetti; Valeria Specchia; Gioacchino Palumbo; Sergio Pimpinelli; Maria Berloco
Journal:  PLoS One       Date:  2015-03-31       Impact factor: 3.240

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