Literature DB >> 19470757

Functional dissection of the human TNRC6 (GW182-related) family of proteins.

David Baillat1, Ramin Shiekhattar.   

Abstract

Argonaute (Ago) proteins through their association with small RNAs perform a critical function in the effector step of RNA interference. The TNRC6 (trinucleotide repeat containing 6) family of proteins have been shown to stably associate with Agos in mammalian cells. Here, we describe the isolation and functional characterization of TNRC6B- and TNRC6C-containing complexes. We show that TNRC6B and TNRC6C proteins associate with all four human Agos which are already loaded with microRNAs. Detailed domain analysis of TNRC6B protein indicated that distinct domains of the protein are required for Ago binding and P-body localization. Functional analysis using reporter constructs responsive to TNRC6B tethered through an MS2-binding domain indicates that neither the Ago-binding nor the P-body localization domains are required for translational silencing. In contrast, the C-terminal domain containing the RNA recognition motif plays a critical role in the silencing mediated by the TNRC6B protein.

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Year:  2009        PMID: 19470757      PMCID: PMC2715800          DOI: 10.1128/MCB.00380-09

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  49 in total

1.  A role for the P-body component GW182 in microRNA function.

Authors:  Jidong Liu; Fabiola V Rivas; James Wohlschlegel; John R Yates; Roy Parker; Gregory J Hannon
Journal:  Nat Cell Biol       Date:  2005-11-13       Impact factor: 28.824

2.  MicroRNAs control translation initiation by inhibiting eukaryotic initiation factor 4E/cap and poly(A) tail function.

Authors:  David T Humphreys; Belinda J Westman; David I K Martin; Thomas Preiss
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-15       Impact factor: 11.205

3.  Identification of novel argonaute-associated proteins.

Authors:  Gunter Meister; Markus Landthaler; Lasse Peters; Po Yu Chen; Henning Urlaub; Reinhard Lührmann; Thomas Tuschl
Journal:  Curr Biol       Date:  2005-11-10       Impact factor: 10.834

4.  Human RISC couples microRNA biogenesis and posttranscriptional gene silencing.

Authors:  Richard I Gregory; Thimmaiah P Chendrimada; Neil Cooch; Ramin Shiekhattar
Journal:  Cell       Date:  2005-11-03       Impact factor: 41.582

5.  A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing.

Authors:  Jan Rehwinkel; Isabelle Behm-Ansmant; David Gatfield; Elisa Izaurralde
Journal:  RNA       Date:  2005-09-21       Impact factor: 4.942

6.  Regulation by let-7 and lin-4 miRNAs results in target mRNA degradation.

Authors:  Shveta Bagga; John Bracht; Shaun Hunter; Katlin Massirer; Janette Holtz; Rachel Eachus; Amy E Pasquinelli
Journal:  Cell       Date:  2005-08-26       Impact factor: 41.582

7.  Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping.

Authors:  Martin Fenger-Grøn; Christy Fillman; Bodil Norrild; Jens Lykke-Andersen
Journal:  Mol Cell       Date:  2005-12-22       Impact factor: 17.970

8.  A human, ATP-independent, RISC assembly machine fueled by pre-miRNA.

Authors:  Elisavet Maniataki; Zissimos Mourelatos
Journal:  Genes Dev       Date:  2005-12-15       Impact factor: 11.361

9.  The developmental timing regulator AIN-1 interacts with miRISCs and may target the argonaute protein ALG-1 to cytoplasmic P bodies in C. elegans.

Authors:  Lei Ding; Andrew Spencer; Kiyokazu Morita; Min Han
Journal:  Mol Cell       Date:  2005-08-19       Impact factor: 17.970

10.  Short RNAs repress translation after initiation in mammalian cells.

Authors:  Christian P Petersen; Marie-Eve Bordeleau; Jerry Pelletier; Phillip A Sharp
Journal:  Mol Cell       Date:  2006-02-17       Impact factor: 17.970

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  51 in total

1.  miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT.

Authors:  Marc R Fabian; Maja K Cieplak; Filipp Frank; Masahiro Morita; Jonathan Green; Tharan Srikumar; Bhushan Nagar; Tadashi Yamamoto; Brian Raught; Thomas F Duchaine; Nahum Sonenberg
Journal:  Nat Struct Mol Biol       Date:  2011-10-07       Impact factor: 15.369

Review 2.  Mechanisms of deadenylation-dependent decay.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-09-15       Impact factor: 9.957

3.  Biochemical isolation of Argonaute protein complexes by Ago-APP.

Authors:  Judith Hauptmann; Daniel Schraivogel; Astrid Bruckmann; Sudhir Manickavel; Leonhard Jakob; Norbert Eichner; Janina Pfaff; Marc Urban; Stefanie Sprunck; Markus Hafner; Thomas Tuschl; Rainer Deutzmann; Gunter Meister
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-08       Impact factor: 11.205

Review 4.  Post-transcriptional gene silencing, transcriptional gene silencing and human immunodeficiency virus.

Authors:  Catalina Méndez; Chantelle L Ahlenstiel; Anthony D Kelleher
Journal:  World J Virol       Date:  2015-08-12

5.  The crystal structure of human Argonaute2.

Authors:  Nicole T Schirle; Ian J MacRae
Journal:  Science       Date:  2012-04-26       Impact factor: 47.728

Review 6.  A combined immunoprecipitation, mass spectrometric and nucleic acid sequencing approach to determine microRNA-mediated post-transcriptional gene regulatory networks.

Authors:  Jeffrey N Savas; Naoko Tanese
Journal:  Brief Funct Genomics       Date:  2010-01-06       Impact factor: 4.241

7.  Structural features of Argonaute-GW182 protein interactions.

Authors:  Janina Pfaff; Janosch Hennig; Franz Herzog; Ruedi Aebersold; Michael Sattler; Dierk Niessing; Gunter Meister
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-16       Impact factor: 11.205

8.  Trim65: a cofactor for regulation of the microRNA pathway.

Authors:  Shitao Li; Lingyan Wang; Bishi Fu; Martin E Dorf
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

9.  Perturbation of the P-body component Mov10 inhibits HIV-1 infectivity.

Authors:  Vyacheslav Furtak; Alok Mulky; Stephen A Rawlings; Lina Kozhaya; KyeongEun Lee; Vineet N Kewalramani; Derya Unutmaz
Journal:  PLoS One       Date:  2010-02-05       Impact factor: 3.240

10.  Dynamical modeling of microRNA action on the protein translation process.

Authors:  Andrei Zinovyev; Nadya Morozova; Nora Nonne; Emmanuel Barillot; Annick Harel-Bellan; Alexander N Gorban
Journal:  BMC Syst Biol       Date:  2010-02-24
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