Literature DB >> 25483047

Trim65: a cofactor for regulation of the microRNA pathway.

Shitao Li1, Lingyan Wang, Bishi Fu, Martin E Dorf.   

Abstract

MicroRNA (miRNA) comprise a large family of non-protein coding transcripts which regulate gene expression in diverse biological pathways of both plants and animals. We recently used a systematic proteomic approach to generate a protein interactome map of the human miRNA pathway involved in miRNA biogenesis and processing. The interactome expands the number of candidate proteins in the miRNA pathway and connects the network to other cellular processes. Functional analyses identified TRIM65 and at least 3 other proteins as novel regulators of the miRNA pathway. Biochemical studies established that TRIM65 forms stable complexes with TNRC6 proteins and these molecules co-localize in P-body-like structures. Gain of function and RNAi analyses reveal that TRIM65 negatively regulates miRNA-driven suppression of mRNA translation by targeting TNRC6 proteins for ubiquitination and degradation. The potential molecular mechanisms which regulate TRIM65 catalytic activity are discussed.

Entities:  

Keywords:  AGO, Argonaute; AP-MS, Affinity purification coupled with mass spectrometry; DGCR8, DiGeorge syndrome critical region gene 8; HCIP, High confidence interacting protein; IMP-1, IGF2 mRNA-binding protein 1; MOV10, Moloney leukemia virus 10; MiRNA, microRNA; PDCD4, Programmed cell death 4; PTEN, Phosphatase and tensin homolog; RISC, RNA-induced silencing complex; RNA-induced silencing complex; TARBP2, TAR (HIV-1) RNA binding protein 2; TNRC6; TNRC6, Trinucleotide repeat containing 6; TRIM65, Tripartite Motif-Containing 65; interactome; proteomics; tripartite motif proteins; ubiquitin E3 ligase

Mesh:

Substances:

Year:  2014        PMID: 25483047      PMCID: PMC4615580          DOI: 10.4161/rna.36179

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  81 in total

1.  Cutting edge: a variant of the IL-23R gene associated with inflammatory bowel disease induces loss of microRNA regulation and enhanced protein production.

Authors:  Antonie Zwiers; Laurens Kraal; Tineke C T M van de Pouw Kraan; Thomas Wurdinger; Gerd Bouma; Georg Kraal
Journal:  J Immunol       Date:  2012-01-18       Impact factor: 5.422

2.  Lin28: A microRNA regulator with a macro role.

Authors:  Srinivas R Viswanathan; George Q Daley
Journal:  Cell       Date:  2010-02-19       Impact factor: 41.582

Review 3.  MicroRNAs in stress signaling and human disease.

Authors:  Joshua T Mendell; Eric N Olson
Journal:  Cell       Date:  2012-03-16       Impact factor: 41.582

Review 4.  Alternative miRNA biogenesis pathways and the interpretation of core miRNA pathway mutants.

Authors:  Jr-Shiuan Yang; Eric C Lai
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

5.  Mapping a dynamic innate immunity protein interaction network regulating type I interferon production.

Authors:  Shitao Li; Lingyan Wang; Michael Berman; Young-Yun Kong; Martin E Dorf
Journal:  Immunity       Date:  2011-09-08       Impact factor: 31.745

6.  Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.

Authors:  Alfredo Castello; Bernd Fischer; Katrin Eichelbaum; Rastislav Horos; Benedikt M Beckmann; Claudia Strein; Norman E Davey; David T Humphreys; Thomas Preiss; Lars M Steinmetz; Jeroen Krijgsveld; Matthias W Hentze
Journal:  Cell       Date:  2012-05-31       Impact factor: 41.582

7.  The let-7 target gene mouse lin-41 is a stem cell specific E3 ubiquitin ligase for the miRNA pathway protein Ago2.

Authors:  Agnieszka Rybak; Heiko Fuchs; Kamyar Hadian; Lena Smirnova; Ellery A Wulczyn; Geert Michel; Robert Nitsch; Daniel Krappmann; F Gregory Wulczyn
Journal:  Nat Cell Biol       Date:  2009-11-08       Impact factor: 28.824

8.  Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs.

Authors:  Markus Landthaler; Dimos Gaidatzis; Andrea Rothballer; Po Yu Chen; Steven Joseph Soll; Lana Dinic; Tolulope Ojo; Markus Hafner; Mihaela Zavolan; Thomas Tuschl
Journal:  RNA       Date:  2008-10-31       Impact factor: 4.942

9.  Genomic analysis of the TRIM family reveals two groups of genes with distinct evolutionary properties.

Authors:  Marco Sardiello; Stefano Cairo; Bianca Fontanella; Andrea Ballabio; Germana Meroni
Journal:  BMC Evol Biol       Date:  2008-08-01       Impact factor: 3.260

10.  Differential RISC association of endogenous human microRNAs predicts their inhibitory potential.

Authors:  Omar Flores; Edward M Kennedy; Rebecca L Skalsky; Bryan R Cullen
Journal:  Nucleic Acids Res       Date:  2014-01-23       Impact factor: 16.971

View more
  5 in total

1.  TRIM32 Senses and Restricts Influenza A Virus by Ubiquitination of PB1 Polymerase.

Authors:  Bishi Fu; Lingyan Wang; Hao Ding; Jens C Schwamborn; Shitao Li; Martin E Dorf
Journal:  PLoS Pathog       Date:  2015-06-09       Impact factor: 6.823

Review 2.  The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions.

Authors:  Benedikt M Beckmann; Alfredo Castello; Jan Medenbach
Journal:  Pflugers Arch       Date:  2016-05-10       Impact factor: 3.657

Review 3.  The Emerging Roles of Tripartite Motif Proteins (TRIMs) in Acute Lung Injury.

Authors:  Yingjie Huang; Yue Xiao; Xuekang Zhang; Xuan Huang; Yong Li
Journal:  J Immunol Res       Date:  2021-10-19       Impact factor: 4.818

4.  Knockdown of TRIM65 inhibits lung cancer cell proliferation, migration and invasion: A therapeutic target in human lung cancer.

Authors:  Xiao-Lin Wang; Wei-Ping Shi; Hong-Can Shi; Shi-Chun Lu; Kang Wang; Chao Sun; Jian-Sheng He; Wei-Guo Jin; Xiao-Xia Lv; Hui Zou; Yu-Sheng Shu
Journal:  Oncotarget       Date:  2016-12-06

Review 5.  Roles of MOV10 in Animal RNA Virus Infection.

Authors:  Feng Su; Xueming Liu; Yunliang Jiang
Journal:  Front Vet Sci       Date:  2020-09-16
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.