Literature DB >> 19407395

Cloning, expression, purification and crystallization as well as X-ray fluorescence and preliminary X-ray diffraction analyses of human ADP-ribosylhydrolase 1.

Stefan Kernstock1, Friedrich Koch-Nolte, Jochen Mueller-Dieckmann, Manfred S Weiss, Christoph Mueller-Dieckmann.   

Abstract

Human ADP-ribosylhydrolase 1 (hARH1, ADPRH) cleaves the glycosidic bond of ADP-ribose attached to an Arg residue of a protein. hARH1 has been cloned, expressed heterologously in Escherichia coli, purified and crystallized in complex with K(+) and ADP. The orthorhombic crystals contained one monomer per asymmetric unit, exhibited a solvent content of 43% and diffracted X-rays to a resolution of 1.9 A. A prerequisite for obtaining well diffracting crystals was the performance of X-ray fluorescence analysis on poorly diffracting apo hARH1 crystals, which revealed the presence of trace amounts of K(+) in the crystal. Adding K-ADP to the crystallization cocktail then resulted in a crystal of different morphology and with dramatically improved diffraction properties.

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Year:  2009        PMID: 19407395      PMCID: PMC2675603          DOI: 10.1107/S1744309109014067

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  32 in total

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Authors:  A A Vaguine; J Richelle; S J Wodak
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-01-01

Review 2.  A quantitative approach to data-collection strategies.

Authors:  Gleb P Bourenkov; Alexander N Popov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

3.  On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths.

Authors:  Christoph Mueller-Dieckmann; Santosh Panjikar; Andrea Schmidt; Simone Mueller; Jochen Kuper; Arie Geerlof; Matthias Wilmanns; Rajesh K Singh; Paul A Tucker; Manfred S Weiss
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-02-21

4.  The structure of human ADP-ribosylhydrolase 3 (ARH3) provides insights into the reversibility of protein ADP-ribosylation.

Authors:  Christoph Mueller-Dieckmann; Stefan Kernstock; Michael Lisurek; Jens Peter von Kries; Friedrich Haag; Manfred S Weiss; Friedrich Koch-Nolte
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-02       Impact factor: 11.205

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  Protein production by auto-induction in high density shaking cultures.

Authors:  F William Studier
Journal:  Protein Expr Purif       Date:  2005-05       Impact factor: 1.650

7.  The family of toxin-related ecto-ADP-ribosyltransferases in humans and the mouse.

Authors:  Gustavo Glowacki; Rickmer Braren; Kathrin Firner; Marion Nissen; Maren Kühl; Pedro Reche; Fernando Bazan; Marina Cetkovic-Cvrlje; Edward Leiter; Friedrich Haag; Friedrich Koch-Nolte
Journal:  Protein Sci       Date:  2002-07       Impact factor: 6.725

8.  In silico characterization of the family of PARP-like poly(ADP-ribosyl)transferases (pARTs).

Authors:  Helge Otto; Pedro A Reche; Fernando Bazan; Katharina Dittmar; Friedrich Haag; Friedrich Koch-Nolte
Journal:  BMC Genomics       Date:  2005-10-04       Impact factor: 3.969

Review 9.  Molecular mechanisms of the cytotoxicity of ADP-ribosylating toxins.

Authors:  Qing Deng; Joseph T Barbieri
Journal:  Annu Rev Microbiol       Date:  2008       Impact factor: 16.232

Review 10.  The expanding field of poly(ADP-ribosyl)ation reactions. 'Protein Modifications: Beyond the Usual Suspects' Review Series.

Authors:  Antoinette Hakmé; Heng-Kuan Wong; Françoise Dantzer; Valérie Schreiber
Journal:  EMBO Rep       Date:  2008-10-17       Impact factor: 8.807

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  5 in total

1.  Defective heart chamber growth and myofibrillogenesis after knockout of adprhl1 gene function by targeted disruption of the ancestral catalytic active site.

Authors:  Stuart J Smith; Norma Towers; Kim Demetriou; Timothy J Mohun
Journal:  PLoS One       Date:  2020-07-29       Impact factor: 3.240

Review 2.  Emerging roles of ADP-ribosyl-acceptor hydrolases (ARHs) in tumorigenesis and cell death pathways.

Authors:  Xiangning Bu; Jiro Kato; Joel Moss
Journal:  Biochem Pharmacol       Date:  2018-09-27       Impact factor: 5.858

Review 3.  Structural biology of the writers, readers, and erasers in mono- and poly(ADP-ribose) mediated signaling.

Authors:  Tobias Karlberg; Marie-France Langelier; John M Pascal; Herwig Schüler
Journal:  Mol Aspects Med       Date:  2013-02-28

4.  The cardiac-restricted protein ADP-ribosylhydrolase-like 1 is essential for heart chamber outgrowth and acts on muscle actin filament assembly.

Authors:  Stuart J Smith; Norma Towers; José W Saldanha; Catherine A Shang; S Radma Mahmood; William R Taylor; Timothy J Mohun
Journal:  Dev Biol       Date:  2016-05-20       Impact factor: 3.582

5.  Understanding the differences of the ligand binding/unbinding pathways between phosphorylated and non-phosphorylated ARH1 using molecular dynamics simulations.

Authors:  Jingxuan Zhu; Yishuo Lv; Xiaosong Han; Dong Xu; Weiwei Han
Journal:  Sci Rep       Date:  2017-09-29       Impact factor: 4.379

  5 in total

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