Literature DB >> 16369094

A quantitative approach to data-collection strategies.

Gleb P Bourenkov1, Alexander N Popov.   

Abstract

Statistical descriptors of the X-ray diffraction data set for a macromolecular crystal can be modelled using the information present in the initial diffraction images. Quantitative relationships between the crystal quality, beam apertures, oscillation width, resolution limit, redundancy and the data statistics are presented. They are analysed in terms of the radiation-dose requirements based on modelling in program the BEST. The influence of radiation damage on the data statistics is discussed.

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Year:  2005        PMID: 16369094     DOI: 10.1107/S0907444905033998

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  46 in total

1.  Crystallization and preliminary X-ray diffraction of malate dehydrogenase from Plasmodium falciparum.

Authors:  Carsten Wrenger; Ingrid B Müller; Sabine Butzloff; Rositsa Jordanova; Sergey Lunev; Matthew R Groves
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-05-23

2.  Purification, crystallization and preliminary X-ray analysis of the aspartate aminotransferase of Plasmodium falciparum.

Authors:  Rishabh Jain; Rositsa Jordanova; Ingrid B Müller; Carsten Wrenger; Matthew R Groves
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-03-31

3.  DNA-dependent formation of transcription factor pairs alters their binding specificity.

Authors:  Arttu Jolma; Yimeng Yin; Kazuhiro R Nitta; Kashyap Dave; Alexander Popov; Minna Taipale; Martin Enge; Teemu Kivioja; Ekaterina Morgunova; Jussi Taipale
Journal:  Nature       Date:  2015-11-09       Impact factor: 49.962

4.  Purification, crystallization and preliminary X-ray diffraction analysis of pyridoxal kinase from Plasmodium falciparum (PfPdxK).

Authors:  Thales Kronenberger; Sergey Lunev; Carsten Wrenger; Matthew R Groves
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-10-25       Impact factor: 1.056

5.  AutoDrug: fully automated macromolecular crystallography workflows for fragment-based drug discovery.

Authors:  Yingssu Tsai; Scott E McPhillips; Ana González; Timothy M McPhillips; Daniel Zinn; Aina E Cohen; Michael D Feese; David Bushnell; Theresa Tiefenbrunn; C David Stout; Bertram Ludaescher; Britt Hedman; Keith O Hodgson; S Michael Soltis
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-04-11

6.  Structural insights into the adaptation of proliferating cell nuclear antigen (PCNA) from Haloferax volcanii to a high-salt environment.

Authors:  Ekaterina Morgunova; Fiona C Gray; Stuart A Macneill; Rudolf Ladenstein
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-09-16

7.  Optimization of data collection taking radiation damage into account.

Authors:  Gleb P Bourenkov; Alexander N Popov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

8.  Carrying out an optimal experiment.

Authors:  Zbigniew Dauter
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

9.  Radiation damage in macromolecular crystallography: what is it and why should we care?

Authors:  Elspeth F Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

10.  Diffraction data analysis in the presence of radiation damage.

Authors:  Dominika Borek; Marcin Cymborowski; Mischa Machius; Wladek Minor; Zbyszek Otwinowski
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24
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