Literature DB >> 12070318

The family of toxin-related ecto-ADP-ribosyltransferases in humans and the mouse.

Gustavo Glowacki1, Rickmer Braren, Kathrin Firner, Marion Nissen, Maren Kühl, Pedro Reche, Fernando Bazan, Marina Cetkovic-Cvrlje, Edward Leiter, Friedrich Haag, Friedrich Koch-Nolte.   

Abstract

ADP-ribosyltransferases including toxins secreted by Vibrio cholera, Pseudomonas aerurginosa, and other pathogenic bacteria inactivate the function of human target proteins by attaching ADP-ribose onto a critical amino acid residue. Cross-species polymerase chain reaction (PCR) and database mining identified the orthologs of these ADP-ribosylating toxins in humans and the mouse. The human genome contains four functional toxin-related ADP-ribosyltransferase genes (ARTs) and two related intron-containing pseudogenes; the mouse has six functional orthologs. The human and mouse ART genes map to chromosomal regions with conserved linkage synteny. The individual ART genes reveal highly restricted expression patterns, which are largely conserved in humans and the mouse. We confirmed the predicted extracellular location of the ART proteins by expressing recombinant ARTs in insect cells. Two human and four mouse ARTs contain the active site motif (R-S-EXE) typical of arginine-specific ADP-ribosyltransferases and exhibit the predicted enzyme activities. Two other human ARTs and their murine orthologues deviate in the active site motif and lack detectable enzyme activity. Conceivably, these ARTs may have acquired a new specificity or function. The position-sensitive iterative database search program PSI-BLAST connected the mammalian ARTs with most known bacterial ADP-ribosylating toxins. In contrast, no related open reading frames occur in the four completed genomes of lower eucaryotes (yeast, worm, fly, and mustard weed). Interestingly, these organisms also lack genes for ADP-ribosylhydrolases, the enzymes that reverse protein ADP-ribosylation. This suggests that the two enzyme families that catalyze reversible mono-ADP-ribosylation either were lost from the genomes of these nonchordata eucaryotes or were subject to horizontal gene transfer between kingdoms.

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Year:  2002        PMID: 12070318      PMCID: PMC2373659          DOI: 10.1110/ps.0200602

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  42 in total

1.  Initial sequencing and analysis of the human genome.

Authors:  E S Lander; L M Linton; B Birren; C Nusbaum; M C Zody; J Baldwin; K Devon; K Dewar; M Doyle; W FitzHugh; R Funke; D Gage; K Harris; A Heaford; J Howland; L Kann; J Lehoczky; R LeVine; P McEwan; K McKernan; J Meldrim; J P Mesirov; C Miranda; W Morris; J Naylor; C Raymond; M Rosetti; R Santos; A Sheridan; C Sougnez; Y Stange-Thomann; N Stojanovic; A Subramanian; D Wyman; J Rogers; J Sulston; R Ainscough; S Beck; D Bentley; J Burton; C Clee; N Carter; A Coulson; R Deadman; P Deloukas; A Dunham; I Dunham; R Durbin; L French; D Grafham; S Gregory; T Hubbard; S Humphray; A Hunt; M Jones; C Lloyd; A McMurray; L Matthews; S Mercer; S Milne; J C Mullikin; A Mungall; R Plumb; M Ross; R Shownkeen; S Sims; R H Waterston; R K Wilson; L W Hillier; J D McPherson; M A Marra; E R Mardis; L A Fulton; A T Chinwalla; K H Pepin; W R Gish; S L Chissoe; M C Wendl; K D Delehaunty; T L Miner; A Delehaunty; J B Kramer; L L Cook; R S Fulton; D L Johnson; P J Minx; S W Clifton; T Hawkins; E Branscomb; P Predki; P Richardson; S Wenning; T Slezak; N Doggett; J F Cheng; A Olsen; S Lucas; C Elkin; E Uberbacher; M Frazier; R A Gibbs; D M Muzny; S E Scherer; J B Bouck; E J Sodergren; K C Worley; C M Rives; J H Gorrell; M L Metzker; S L Naylor; R S Kucherlapati; D L Nelson; G M Weinstock; Y Sakaki; A Fujiyama; M Hattori; T Yada; A Toyoda; T Itoh; C Kawagoe; H Watanabe; Y Totoki; T Taylor; J Weissenbach; R Heilig; W Saurin; F Artiguenave; P Brottier; T Bruls; E Pelletier; C Robert; P Wincker; D R Smith; L Doucette-Stamm; M Rubenfield; K Weinstock; H M Lee; J Dubois; A Rosenthal; M Platzer; G Nyakatura; S Taudien; A Rump; H Yang; J Yu; J Wang; G Huang; J Gu; L Hood; L Rowen; A Madan; S Qin; R W Davis; N A Federspiel; A P Abola; M J Proctor; R M Myers; J Schmutz; M Dickson; J Grimwood; D R Cox; M V Olson; R Kaul; C Raymond; N Shimizu; K Kawasaki; S Minoshima; G A Evans; M Athanasiou; R Schultz; B A Roe; F Chen; H Pan; J Ramser; H Lehrach; R Reinhardt; W R McCombie; M de la Bastide; N Dedhia; H Blöcker; K Hornischer; G Nordsiek; R Agarwala; L Aravind; J A Bailey; A Bateman; S Batzoglou; E Birney; P Bork; D G Brown; C B Burge; L Cerutti; H C Chen; D Church; M Clamp; R R Copley; T Doerks; S R Eddy; E E Eichler; T S Furey; J Galagan; J G Gilbert; C Harmon; Y Hayashizaki; D Haussler; H Hermjakob; K Hokamp; W Jang; L S Johnson; T A Jones; S Kasif; A Kaspryzk; S Kennedy; W J Kent; P Kitts; E V Koonin; I Korf; D Kulp; D Lancet; T M Lowe; A McLysaght; T Mikkelsen; J V Moran; N Mulder; V J Pollara; C P Ponting; G Schuler; J Schultz; G Slater; A F Smit; E Stupka; J Szustakowki; D Thierry-Mieg; J Thierry-Mieg; L Wagner; J Wallis; R Wheeler; A Williams; Y I Wolf; K H Wolfe; S P Yang; R F Yeh; F Collins; M S Guyer; J Peterson; A Felsenfeld; K A Wetterstrand; A Patrinos; M J Morgan; P de Jong; J J Catanese; K Osoegawa; H Shizuya; S Choi; Y J Chen; J Szustakowki
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  An abundance of bacterial ADP-ribosyltransferases--implications for the origin of exotoxins and their human homologues.

Authors:  M J Pallen; A C Lam; N J Loman; A McBride
Journal:  Trends Microbiol       Date:  2001-07       Impact factor: 17.079

3.  Genomics. Are there bugs in our genome?

Authors:  J O Andersson; W F Doolittle; C L Nesbø
Journal:  Science       Date:  2001-05-17       Impact factor: 47.728

Review 4.  The world according to PARP.

Authors:  S Smith
Journal:  Trends Biochem Sci       Date:  2001-03       Impact factor: 13.807

Review 5.  Poly(APD-ribosyl)ation, a DNA damage-driven protein modification and regulator of genomic instability.

Authors:  A Bürkle
Journal:  Cancer Lett       Date:  2001-02-10       Impact factor: 8.679

6.  Evolution and mechanism from structures of an ADP-ribosylating toxin and NAD complex.

Authors:  S Han; J A Craig; C D Putnam; N B Carozzi; J A Tainer
Journal:  Nat Struct Biol       Date:  1999-10

7.  The spvB gene-product of the Salmonella enterica virulence plasmid is a mono(ADP-ribosyl)transferase.

Authors:  H Otto; D Tezcan-Merdol; R Girisch; F Haag; M Rhen; F Koch-Nolte
Journal:  Mol Microbiol       Date:  2000-09       Impact factor: 3.501

8.  Crystal structure and novel recognition motif of rho ADP-ribosylating C3 exoenzyme from Clostridium botulinum: structural insights for recognition specificity and catalysis.

Authors:  S Han; A S Arvai; S B Clancy; J A Tainer
Journal:  J Mol Biol       Date:  2001-01-05       Impact factor: 5.469

9.  A novel C3-like ADP-ribosyltransferase from Staphylococcus aureus modifying RhoE and Rnd3.

Authors:  C Wilde; G S Chhatwal; G Schmalzing; K Aktories; I Just
Journal:  J Biol Chem       Date:  2000-12-21       Impact factor: 5.157

10.  Actin is ADP-ribosylated by the Salmonella enterica virulence-associated protein SpvB.

Authors:  D Tezcan-Merdol; T Nyman; U Lindberg; F Haag; F Koch-Nolte; M Rhen
Journal:  Mol Microbiol       Date:  2001-02       Impact factor: 3.501

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  65 in total

Review 1.  NAD+ surfaces again.

Authors:  Mathias Ziegler; Marc Niere
Journal:  Biochem J       Date:  2004-09-15       Impact factor: 3.857

2.  Differential expression of genes related to purinergic signaling in smooth muscle cells, PDGFRα-positive cells, and interstitial cells of Cajal in the murine colon.

Authors:  L E Peri; K M Sanders; V N Mutafova-Yambolieva
Journal:  Neurogastroenterol Motil       Date:  2013-06-30       Impact factor: 3.598

3.  Mechanism of ADP-ribosylation removal revealed by the structure and ligand complexes of the dimanganese mono-ADP-ribosylhydrolase DraG.

Authors:  Catrine L Berthold; He Wang; Stefan Nordlund; Martin Högbom
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-12       Impact factor: 11.205

Review 4.  Chemical biology of protein arginine modifications in epigenetic regulation.

Authors:  Jakob Fuhrmann; Kathleen W Clancy; Paul R Thompson
Journal:  Chem Rev       Date:  2015-05-13       Impact factor: 60.622

5.  PARP1 inhibition alleviates injury in ARH3-deficient mice and human cells.

Authors:  Masato Mashimo; Xiangning Bu; Kazumasa Aoyama; Jiro Kato; Hiroko Ishiwata-Endo; Linda A Stevens; Atsushi Kasamatsu; Lynne A Wolfe; Camilo Toro; David Adams; Thomas Markello; William A Gahl; Joel Moss
Journal:  JCI Insight       Date:  2019-02-21

6.  The structure of human ADP-ribosylhydrolase 3 (ARH3) provides insights into the reversibility of protein ADP-ribosylation.

Authors:  Christoph Mueller-Dieckmann; Stefan Kernstock; Michael Lisurek; Jens Peter von Kries; Friedrich Haag; Manfred S Weiss; Friedrich Koch-Nolte
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-02       Impact factor: 11.205

Review 7.  Mitochondrial dysfunction and NAD(+) metabolism alterations in the pathophysiology of acute brain injury.

Authors:  Katrina Owens; Ji H Park; Rosemary Schuh; Tibor Kristian
Journal:  Transl Stroke Res       Date:  2013-08-10       Impact factor: 6.829

8.  Functional localization of two poly(ADP-ribose)-degrading enzymes to the mitochondrial matrix.

Authors:  Marc Niere; Stefan Kernstock; Friedrich Koch-Nolte; Mathias Ziegler
Journal:  Mol Cell Biol       Date:  2007-11-08       Impact factor: 4.272

9.  The 39-kDa poly(ADP-ribose) glycohydrolase ARH3 hydrolyzes O-acetyl-ADP-ribose, a product of the Sir2 family of acetyl-histone deacetylases.

Authors:  Tohru Ono; Atsushi Kasamatsu; Shunya Oka; Joel Moss
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-30       Impact factor: 11.205

10.  Glycosylphosphatidylinositol-anchored arginine-specific ADP-ribosyltransferase7.1 (Art7.1) on chicken B cells: the possible role of Art7 in B cell receptor signalling and proliferation.

Authors:  Masaharu Terashima; Mai Takahashi; Makoto Shimoyama; Yoshinori Tanigawa; Takeshi Urano; Mikako Tsuchiya
Journal:  Mol Cell Biochem       Date:  2008-08-12       Impact factor: 3.396

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