Literature DB >> 22290334

A novel method for fast and robust estimation of fluorescence decay dynamics using constrained least-squares deconvolution with Laguerre expansion.

Jing Liu1, Yang Sun, Jinyi Qi, Laura Marcu.   

Abstract

We report a novel method for estimating fluorescence impulse response function (fIRF) from noise-corrupted time-domain fluorescence measurements of biological tissue. This method is based on the use of high-order Laguerre basis functions and a constrained least-squares approach that addresses the problem of overfitting due to increased model complexity. The new method was extensively evaluated on fluorescence data from simulation, fluorescent standard dyes, ex vivo tissue samples of atherosclerotic plaques and in vivo oral carcinoma. Current results demonstrate that this method allows for rapid and accurate deconvolution of multiple channel fluorescence decays without adaptively adjusting the Laguerre scale parameter. The appropriate choice of the scale parameter is essential for accurate estimation of the fIRF. The method described here is anticipated to play an important role in the development of computational techniques for real-time analysis of time-resolved fluorescence data from biological tissues and to support the advancement of fluorescence lifetime instrumentation for biomedical diagnostics by providing a means for on-line robust analysis of fluorescence decay.

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Year:  2012        PMID: 22290334      PMCID: PMC3407553          DOI: 10.1088/0031-9155/57/4/843

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  24 in total

1.  Multimodal characterization of compositional, structural and functional features of human atherosclerotic plaques.

Authors:  Yang Sun; Abhijit J Chaudhari; Matthew Lam; Hongtao Xie; Diego R Yankelevich; Jennifer Phipps; Jing Liu; Michael C Fishbein; Jonathan M Cannata; K Kirk Shung; Laura Marcu
Journal:  Biomed Opt Express       Date:  2011-07-19       Impact factor: 3.732

2.  Laguerre-model blind system identification: cardiovascular dynamics estimated from multiple peripheral circulatory signals.

Authors:  Devin B McCombie; Andrew T Reisner; Haruhiko Harry Asada
Journal:  IEEE Trans Biomed Eng       Date:  2005-11       Impact factor: 4.538

3.  Intramolecular fluorescence quenching of crowned 7-aminocoumarins as potential fluorescent chemosensors.

Authors:  Michael V Rusalov; Sergey I Druzhinin; Boris M Uzhinov
Journal:  J Fluoresc       Date:  2004-03       Impact factor: 2.217

4.  Fully automated deconvolution method for on-line analysis of time-resolved fluorescence spectroscopy data based on an iterative Laguerre expansion technique.

Authors:  Aditi S Dabir; Chintan A Trivedi; Yeontack Ryu; Paritosh Pande; Javier A Jo
Journal:  J Biomed Opt       Date:  2009 Mar-Apr       Impact factor: 3.170

Review 5.  Clinical multiphoton tomography.

Authors:  Karsten König
Journal:  J Biophotonics       Date:  2008-03       Impact factor: 3.207

6.  Fluorescence lifetime discrimination using expectation-maximization algorithm with joint deconvolution.

Authors:  Chit Yaw Fu; Beng Koon Ng; Sirajudeen Gulam Razul
Journal:  J Biomed Opt       Date:  2009 Nov-Dec       Impact factor: 3.170

7.  Identification of nonlinear biological systems using Laguerre expansions of kernels.

Authors:  V Z Marmarelis
Journal:  Ann Biomed Eng       Date:  1993 Nov-Dec       Impact factor: 3.934

8.  Laguerre-based method for analysis of time-resolved fluorescence data: application to in-vivo characterization and diagnosis of atherosclerotic lesions.

Authors:  Javier A Jo; Qiyin Fang; Thanassis Papaioannou; J Dennis Baker; Amir H Dorafshar; Todd Reil; Jian-Hua Qiao; Michael C Fishbein; Julie A Freischlag; Laura Marcu
Journal:  J Biomed Opt       Date:  2006 Mar-Apr       Impact factor: 3.170

9.  Detection of rupture-prone atherosclerotic plaques by time-resolved laser-induced fluorescence spectroscopy.

Authors:  Laura Marcu; Javier A Jo; Qiyin Fang; Thanassis Papaioannou; Todd Reil; Jian-Hua Qiao; J Dennis Baker; Julie A Freischlag; Michael C Fishbein
Journal:  Atherosclerosis       Date:  2008-09-06       Impact factor: 5.162

10.  Wide-field fluorescence lifetime imaging of cancer.

Authors:  James McGinty; Neil P Galletly; Chris Dunsby; Ian Munro; Daniel S Elson; Jose Requejo-Isidro; Patrizia Cohen; Raida Ahmad; Amanda Forsyth; Andrew V Thillainayagam; Mark A A Neil; Paul M W French; Gordon W Stamp
Journal:  Biomed Opt Express       Date:  2010-08-19       Impact factor: 3.732

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  44 in total

1.  FLIm-Guided Raman Imaging to Study Cross-Linking and Calcification of Bovine Pericardium.

Authors:  Tanveer Ahmed Shaik; Alba Alfonso-García; Xiangnan Zhou; Katherine M Arnold; Anne K Haudenschild; Christoph Krafft; Leigh G Griffiths; Jürgen Popp; Laura Marcu
Journal:  Anal Chem       Date:  2020-07-14       Impact factor: 6.986

2.  Deconvolution of fluorescence lifetime imaging microscopy by a library of exponentials.

Authors:  Daniel U Campos-Delgado; O Gutierrez Navarro; E R Arce-Santana; Alex J Walsh; Melissa C Skala; Javier A Jo
Journal:  Opt Express       Date:  2015-09-07       Impact factor: 3.894

3.  Blind deconvolution estimation of fluorescence measurements through quadratic programming.

Authors:  Daniel U Campos-Delgado; Omar Gutierrez-Navarro; Edgar R Arce-Santana; Melissa C Skala; Alex J Walsh; Javier A Jo
Journal:  J Biomed Opt       Date:  2015-07       Impact factor: 3.170

4.  Electrocautery effects on fluorescence lifetime measurements: An in vivo study in the oral cavity.

Authors:  João L Lagarto; Jennifer E Phipps; Leta Faller; Dinglong Ma; Jakob Unger; Julien Bec; Stephen Griffey; Jonathan Sorger; D Gregory Farwell; Laura Marcu
Journal:  J Photochem Photobiol B       Date:  2018-05-26       Impact factor: 6.252

5.  Extended output phasor representation of multi-spectral fluorescence lifetime imaging microscopy.

Authors:  Daniel U Campos-Delgado; O Gutiérrez Navarro; E R Arce-Santana; Javier A Jo
Journal:  Biomed Opt Express       Date:  2015-05-13       Impact factor: 3.732

6.  Technique for real-time tissue characterization based on scanning multispectral fluorescence lifetime spectroscopy (ms-TRFS).

Authors:  Dinglong Ma; Julien Bec; Dimitris Gorpas; Diego Yankelevich; Laura Marcu
Journal:  Biomed Opt Express       Date:  2015-02-25       Impact factor: 3.732

7.  Reply to Comment: 'A novel method for fast and robust estimation of fluorescence decay dynamics using constrained least-square deconvolution with Laguerre expansion'.

Authors:  Dinglong Ma; Jing Liu; Jinyi Qi; Laura Marcu
Journal:  Phys Med Biol       Date:  2017-02-21       Impact factor: 3.609

8.  Design, construction, and validation of a rotary multifunctional intravascular diagnostic catheter combining multispectral fluorescence lifetime imaging and intravascular ultrasound.

Authors:  Julien Bec; Hongtao Xie; Diego R Yankelevich; Feifei Zhou; Yang Sun; Narugopal Ghata; Ralph Aldredge; Laura Marcu
Journal:  J Biomed Opt       Date:  2012-10       Impact factor: 3.170

9.  Multimodal in vivo imaging of oral cancer using fluorescence lifetime, photoacoustic and ultrasound techniques.

Authors:  Hussain Fatakdawala; Shannon Poti; Feifei Zhou; Yang Sun; Julien Bec; Jing Liu; Diego R Yankelevich; Steven P Tinling; Regina F Gandour-Edwards; D Gregory Farwell; Laura Marcu
Journal:  Biomed Opt Express       Date:  2013-08-26       Impact factor: 3.732

10.  Multispectral fluorescence lifetime imaging system for intravascular diagnostics with ultrasound guidance: in vivo validation in swine arteries.

Authors:  Julien Bec; Dinglong M Ma; Diego R Yankelevich; Jing Liu; William T Ferrier; Jeffrey Southard; Laura Marcu
Journal:  J Biophotonics       Date:  2013-03-13       Impact factor: 3.207

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