Literature DB >> 19403687

Novel microRNAs (miRNAs) encoded by herpesvirus of Turkeys: evidence of miRNA evolution by duplication.

Yongxiu Yao1, Yuguang Zhao, Lorraine P Smith, Michael Watson, Venugopal Nair.   

Abstract

Herpesviruses account for 134 out of the 140 virus-encoded microRNAs (miRNAs) known today. Here we report the identification of 11 novel miRNAs encoded by herpesvirus of turkey (HVT), a virus used as a live vaccine in poultry against the highly oncogenic Marek's disease virus type 1. Ten of these miRNAs were clustered together within the repeat long region of the viral genome, demonstrating some degree of positional conservation with other mardiviruses. Close sequence and phylogenetic relationships of some miRNAs in this cluster indicate evolution by duplication. HVT miRNAs represent the first example of virus-encoded miRNAs that show evolution by duplication.

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Year:  2009        PMID： 19403687      PMCID： PMC2698521          DOI： 10.1128/JVI.00322-09

Source DB:  PubMed          Journal:  J Virol        ISSN： 0022-538X            Impact factor:   5.103


  26 in total

1.  The genome of turkey herpesvirus.

Authors:  C L Afonso; E R Tulman; Z Lu; L Zsak; D L Rock; G F Kutish
Journal:  J Virol       Date:  2001-01       Impact factor: 5.103

2.  A uniform system for microRNA annotation.

Authors:  Victor Ambros; Bonnie Bartel; David P Bartel; Christopher B Burge; James C Carrington; Xuemei Chen; Gideon Dreyfuss; Sean R Eddy; Sam Griffiths-Jones; Mhairi Marshall; Marjori Matzke; Gary Ruvkun; Thomas Tuschl
Journal:  RNA       Date:  2003-03       Impact factor: 4.942

Review 3.  MicroRNAs: genomics, biogenesis, mechanism, and function.

Authors:  David P Bartel
Journal:  Cell       Date:  2004-01-23       Impact factor: 41.582

4.  Mfold web server for nucleic acid folding and hybridization prediction.

Authors:  Michael Zuker
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

Review 5.  The functions of herpesvirus-encoded microRNAs.

Authors:  Finn Grey; Lauren Hook; Jay Nelson
Journal:  Med Microbiol Immunol       Date:  2007-12-18       Impact factor: 3.402

Review 6.  Viral and cellular microRNAs as determinants of viral pathogenesis and immunity.

Authors:  Eva Gottwein; Bryan R Cullen
Journal:  Cell Host Microbe       Date:  2008-06-12       Impact factor: 21.023

7.  MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences.

Authors:  Sudhir Kumar; Masatoshi Nei; Joel Dudley; Koichiro Tamura
Journal:  Brief Bioinform       Date:  2008-04-16       Impact factor: 11.622

8.  A herpesvirus isolated from kidney cell culture of normal turkeys.

Authors:  H Kawamura; D J King; D P Anderson
Journal:  Avian Dis       Date:  1969-11       Impact factor: 1.577

9.  Adaptive evolution of newly emerged micro-RNA genes in Drosophila.

Authors:  Jian Lu; Yonggui Fu; Supriya Kumar; Yang Shen; Kai Zeng; Anlong Xu; Richard Carthew; Chung-I Wu
Journal:  Mol Biol Evol       Date:  2008-02-22       Impact factor: 16.240

10.  Deep sequencing of chicken microRNAs.

Authors:  Joan Burnside; Ming Ouyang; Amy Anderson; Erin Bernberg; Cheng Lu; Blake C Meyers; Pamela J Green; Milos Markis; Grace Isaacs; Emily Huang; Robin W Morgan
Journal:  BMC Genomics       Date:  2008-04-22       Impact factor: 3.969
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  9 in total

Review 1.  Noncoding RNPs of viral origin.

Authors:  Joan Steitz; Sumit Borah; Demian Cazalla; Victor Fok; Robin Lytle; Rachel Mitton-Fry; Kasandra Riley; Tasleem Samji
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-03-01       Impact factor: 10.005

Review 2.  miRNAs in the pathogenesis of oncogenic human viruses.

Authors:  Zhen Lin; Erik K Flemington
Journal:  Cancer Lett       Date:  2010-10-12       Impact factor: 8.679

3.  MicroRNA-26a-mediated regulation of interleukin-2 expression in transformed avian lymphocyte lines.

Authors:  Hongtao Xu; Yongxiu Yao; Lorraine P Smith; Venugopal Nair
Journal:  Cancer Cell Int       Date:  2010-05-04       Impact factor: 5.722

4.  In vivo expression patterns of microRNAs of Gallid herpesvirus 2 (GaHV-2) during the virus life cycle and development of Marek's disease lymphomas.

Authors:  Pu Zhao; Xiu-Jie Li; Man Teng; Lu Dang; Zu-Hua Yu; Jia-Qi Chi; Jing-Wei Su; Gai-Ping Zhang; Jun Luo
Journal:  Virus Genes       Date:  2015-02-11       Impact factor: 2.332

5.  Virulent duck enteritis virus infected DEF cells generate a unique pattern of viral microRNAs and a novel set of host microRNAs.

Authors:  Xianglong Wu; Renyong Jia; Jiakun Zhou; Mingshu Wang; Shun Chen; Mafeng Liu; Dekang Zhu; Xinxin Zhao; Kunfeng Sun; Qiao Yang; Ying Wu; Zhongqiong Yin; Xiaoyue Chen; Jue Wang; Anchun Cheng
Journal:  BMC Vet Res       Date:  2018-04-28       Impact factor: 2.741

6.  Efficient Mutagenesis of Marek's Disease Virus-Encoded microRNAs Using a CRISPR/Cas9-Based Gene Editing System.

Authors:  Jun Luo; Man Teng; Xusheng Zai; Na Tang; Yaoyao Zhang; Ahmedali Mandviwala; Vishwanatha R A P Reddy; Susan Baigent; Yongxiu Yao; Venugopal Nair
Journal:  Viruses       Date:  2020-04-20       Impact factor: 5.048

Review 7.  The Roles of MicroRNAs (miRNAs) in Avian Response to Viral Infection and Pathogenesis of Avian Immunosuppressive Diseases.

Authors:  Linyi Zhou; Shijun J Zheng
Journal:  Int J Mol Sci       Date:  2019-11-01       Impact factor: 5.923

Review 8.  Role of virus-encoded microRNAs in Avian viral diseases.

Authors:  Yongxiu Yao; Venugopal Nair
Journal:  Viruses       Date:  2014-03-21       Impact factor: 5.048

9.  A phylogenomic analysis of Marek's disease virus reveals independent paths to virulence in Eurasia and North America.

Authors:  Jakob Trimpert; Nicole Groenke; Maria Jenckel; Shulin He; Dusan Kunec; Moriah L Szpara; Stephen J Spatz; Nikolaus Osterrieder; Dino P McMahon
Journal:  Evol Appl       Date:  2017-09-03       Impact factor: 5.183
  9 in total

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