Literature DB >> 19383449

The stability of cellulose: a statistical perspective from a coarse-grained model of hydrogen-bond networks.

Tongye Shen1, S Gnanakaran.   

Abstract

A critical roadblock to the production of biofuels from lignocellulosic biomass is the efficient degradation of crystalline microfibrils of cellulose to glucose. A microscopic understanding of how different physical conditions affect the overall stability of the crystalline structure of microfibrils could facilitate the design of more effective protocols for their degradation. One of the essential physical interactions that stabilizes microfibrils is a network of hydrogen (H) bonds: both intrachain H-bonds between neighboring monomers of a single cellulose polymer chain and interchain H-bonds between adjacent chains. We construct a statistical mechanical model of cellulose assembly at the resolution of explicit hydrogen-bond networks. Using the transfer matrix method, the partition function and the subsequent statistical properties are evaluated. With the help of this lattice-based model, we capture the plasticity of the H-bond network in cellulose due to frustration and redundancy in the placement of H-bonds. This plasticity is responsible for the stability of cellulose over a wide range of temperatures. Stable intrachain and interchain H-bonds are identified as a function of temperature that could possibly be manipulated toward rational destruction of crystalline cellulose.

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Year:  2009        PMID: 19383449      PMCID: PMC2718297          DOI: 10.1016/j.bpj.2008.12.3953

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  13 in total

1.  Crystal structure and hydrogen bonding system in cellulose I(alpha) from synchrotron X-ray and neutron fiber diffraction.

Authors:  Yoshiharu Nishiyama; Junji Sugiyama; Henri Chanzy; Paul Langan
Journal:  J Am Chem Soc       Date:  2003-11-26       Impact factor: 15.419

2.  Crystal structure and hydrogen-bonding system in cellulose Ibeta from synchrotron X-ray and neutron fiber diffraction.

Authors:  Yoshiharu Nishiyama; Paul Langan; Henri Chanzy
Journal:  J Am Chem Soc       Date:  2002-08-07       Impact factor: 15.419

3.  Nonequilibrium self-assembly of linear fibers: microscopic treatment of growth, decay, catastrophe and rescue.

Authors:  Chenghang Zong; Ting Lu; Tongye Shen; Peter G Wolynes
Journal:  Phys Biol       Date:  2006-03-31       Impact factor: 2.583

4.  Swelling behavior of the cellulose Ibeta crystal models by molecular dynamics.

Authors:  Toshifumi Yui; Shinya Nishimura; Shingo Akiba; Sachio Hayashi
Journal:  Carbohydr Res       Date:  2006-08-17       Impact factor: 2.104

5.  Study on temperature-dependent changes in hydrogen bonds in cellulose Ibeta by infrared spectroscopy with perturbation-correlation moving-window two-dimensional correlation spectroscopy.

Authors:  Akihiko Watanabe; Shigeaki Morita; Yukihiro Ozaki
Journal:  Biomacromolecules       Date:  2006-11       Impact factor: 6.988

Review 6.  Cellulose, cellulases and cellulosomes.

Authors:  E A Bayer; H Chanzy; R Lamed; Y Shoham
Journal:  Curr Opin Struct Biol       Date:  1998-10       Impact factor: 6.809

7.  Computer simulation studies of microcrystalline cellulose Ibeta.

Authors:  James F Matthews; Cathy E Skopec; Philip E Mason; Pierfrancesco Zuccato; Robert W Torget; Junji Sugiyama; Michael E Himmel; John W Brady
Journal:  Carbohydr Res       Date:  2005-11-17       Impact factor: 2.104

Review 8.  What is (and is not) vital to advancing cellulosic ethanol.

Authors:  Charles E Wyman
Journal:  Trends Biotechnol       Date:  2007-02-22       Impact factor: 19.536

9.  Spin glasses and the statistical mechanics of protein folding.

Authors:  J D Bryngelson; P G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  1987-11       Impact factor: 11.205

10.  Stimuli-responsive polymer nanocomposites inspired by the sea cucumber dermis.

Authors:  Jeffrey R Capadona; Kadhiravan Shanmuganathan; Dustin J Tyler; Stuart J Rowan; Christoph Weder
Journal:  Science       Date:  2008-03-07       Impact factor: 47.728

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  5 in total

1.  Seeing the chemistry in biology with neutron crystallography.

Authors:  Paul Langan; Julian C-H Chen
Journal:  Phys Chem Chem Phys       Date:  2013-07-15       Impact factor: 3.676

2.  Cellulose-graphene quantum dot composite membranes using ionic liquid.

Authors:  A Colburn; N Wanninayake; D Y Kim; D Bhattacharyya
Journal:  J Memb Sci       Date:  2018-04-08       Impact factor: 8.742

3.  Effects of pH on an IDP conformational ensemble explored by molecular dynamics simulation.

Authors:  Richard J Lindsay; Rachael A Mansbach; S Gnanakaran; Tongye Shen
Journal:  Biophys Chem       Date:  2021-01-26       Impact factor: 2.352

4.  Mechanocatalytic Depolymerization of Cellulose With Perfluorinated Sulfonic Acid Ionomers.

Authors:  Ayman Karam; Prince N Amaniampong; José M García Fernández; Claudio Oldani; Sinisa Marinkovic; Boris Estrine; Karine De Oliveira Vigier; François Jérôme
Journal:  Front Chem       Date:  2018-03-22       Impact factor: 5.221

Review 5.  Plant- vs. Bacterial-Derived Cellulose for Wound Healing: A Review.

Authors:  Ruth Naomi; Ruszymah Bt Hj Idrus; Mh Busra Fauzi
Journal:  Int J Environ Res Public Health       Date:  2020-09-18       Impact factor: 3.390

  5 in total

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