Literature DB >> 19347589

Manipulating the Caenorhabditis elegans genome using mariner transposons.

Valérie J Robert1, Jean-Louis Bessereau.   

Abstract

Tc1, one of the founding members of the Tc1/mariner transposon superfamily, was identified in the nematode Caenorhabditis elegans more than 25 years ago. Over the years, Tc1 and other endogenous mariner transposons became valuable tools for mutagenesis and targeted gene inactivation in C. elegans. However, transposition is naturally repressed in the C. elegans germline by an RNAi-like mechanism, necessitating the use of mutant strains in which transposition was globally derepressed, which causes drawbacks such as uncontrolled proliferation of the transposons in the genome and accumulation of background mutations. The more recent mobilization of the Drosophila mariner transposon Mos1 in the C. elegans germline circumvented the problems inherent to endogenous transposons. Mos1 transposition strictly depends on the expression of the Mos transposase, which can be controlled in the germline using inducible promoters. First, Mos1 can be used for insertional mutagenesis. The mobilization of Mos1 copies present on an extrachromosomal array results in the generation of a small number of Mos1 genomic insertions that can be rapidly cloned by inverse PCR. Second, Mos1 insertions can be used for genome engineering. Triggering the excision of a genomic Mos1 insertion causes a chromosomal break, which can be repaired by transgene-instructed gene conversion. This process is used to introduce specific changes in a given gene, such as point mutations, deletions or insertions of a tag, and to create single-copy transgenes.

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Year:  2009        PMID: 19347589     DOI: 10.1007/s10709-009-9362-2

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  79 in total

1.  A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans.

Authors:  Nadine L Vastenhouw; Sylvia E J Fischer; Valérie J P Robert; Karen L Thijssen; Andrew G Fraser; Ravi S Kamath; Julie Ahringer; Ronald H A Plasterk
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2.  The Caenorhabditis elegans gene lin-10 is broadly expressed while required specifically for the determination of vulval cell fates.

Authors:  S K Kim; H R Horvitz
Journal:  Genes Dev       Date:  1990-03       Impact factor: 11.361

3.  daf-12 encodes a nuclear receptor that regulates the dauer diapause and developmental age in C. elegans.

Authors:  A Antebi; W H Yeh; D Tait; E M Hedgecock; D L Riddle
Journal:  Genes Dev       Date:  2000-06-15       Impact factor: 11.361

4.  Insertion and excision of Caenorhabditis elegans transposable element Tc1.

Authors:  D Eide; P Anderson
Journal:  Mol Cell Biol       Date:  1988-02       Impact factor: 4.272

Review 5.  Insertional mutagenesis in C. elegans using the Drosophila transposon Mos1: a method for the rapid identification of mutated genes.

Authors:  Jean-Louis Bessereau
Journal:  Methods Mol Biol       Date:  2006

6.  Caenorhabditis elegans num-1 negatively regulates endocytic recycling.

Authors:  Lars Nilsson; Barbara Conradt; Anne-Françoise Ruaud; Carlos Chih-Hsiung Chen; Julia Hatzold; Jean-Louis Bessereau; Barth D Grant; Simon Tuck
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7.  In vitro shuttle mutagenesis using engineered mariner transposons.

Authors:  Kelly A Robinson; Sophie Goyard; Stephen M Beverley
Journal:  Methods Mol Biol       Date:  2004

8.  Caenorhabditis elegans PlexinA, PLX-1, interacts with transmembrane semaphorins and regulates epidermal morphogenesis.

Authors:  Takashi Fujii; Fumi Nakao; Yukimasa Shibata; Go Shioi; Eiji Kodama; Hajime Fujisawa; Shin Takagi
Journal:  Development       Date:  2002-05       Impact factor: 6.868

9.  Differences in collagen prolyl 4-hydroxylase assembly between two Caenorhabditis nematode species despite high amino acid sequence identity of the enzyme subunits.

Authors:  Alan D Winter; Katriina Keskiaho; Liisa Kukkola; Gillian McCormack; Marie-Anne Felix; Johanna Myllyharju; Antony P Page
Journal:  Matrix Biol       Date:  2007-01-30       Impact factor: 11.583

10.  Shotgun cloning of transposon insertions in the genome of Caenorhabditis elegans.

Authors:  Alexander M van der Linden; Ronald H A Plasterk
Journal:  Comp Funct Genomics       Date:  2004
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  6 in total

Review 1.  From genes to function: the C. elegans genetic toolbox.

Authors:  Thomas Boulin; Oliver Hobert
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2011-11-28       Impact factor: 5.814

2.  Target site selection by the mariner-like element, Mos1.

Authors:  Gwénaelle Crénès; Corinne Moundras; Marie-Véronique Demattei; Yves Bigot; Agnès Petit; Sylvaine Renault
Journal:  Genetica       Date:  2009-07-24       Impact factor: 1.082

Review 3.  The genetics and cell biology of fertilization.

Authors:  Brian D Geldziler; Matthew R Marcello; Diane C Shakes; Andrew Singson
Journal:  Methods Cell Biol       Date:  2011       Impact factor: 1.441

4.  The cyclin-dependent kinase inhibitors, cki-1 and cki-2, act in overlapping but distinct pathways to control cell cycle quiescence during C. elegans development.

Authors:  Sarah H Buck; Daniel Chiu; R Mako Saito
Journal:  Cell Cycle       Date:  2009-08-25       Impact factor: 4.534

5.  A Caenorhabditis elegans locomotion phenotype caused by transgenic repeats of the hlh-17 promoter sequence.

Authors:  Randy F Stout; Vladimir Grubišić; Vladimir Parpura
Journal:  PLoS One       Date:  2013-11-28       Impact factor: 3.240

6.  Tools for Mos1-mediated single copy insertion (mosSCI) with excisable unc-119(+) or NeoR (G418) selection cassettes.

Authors:  Reta Aram; Kailynn MacGillivray; Chengyin Li; Arneet Saltzman
Journal:  MicroPubl Biol       Date:  2019-08-27
  6 in total

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