Literature DB >> 19290629

Galactose oxidase as a model for reactivity at a copper superoxide center.

Kristi J Humphreys1, Liviu M Mirica, Yi Wang, Judith P Klinman.   

Abstract

The mononuclear copper enzyme, galactose oxidase, has been investigated under steady-state conditions via O(2)-consumption assays using 1-O-methyl-alpha-D-galactopyranoside as the sugar substrate to produce an aldehyde at the C-6 position. The rate-determining step of the oxidative half-reaction was probed through the measurement of substrate and solvent deuterium and O-18 isotope effects on k(cat)/K(m)(O(2)). The reaction conforms to a ping-pong mechanism with the kinetic parameters for the reductive half, k(cat)/K(m)(S) = 8.3 x 10(3) M(-1) s(-1) at 10 degrees C and pH 7.0, comparing favorably to literature values. The oxidative half-reaction yielded a value of k(cat)/K(m)(O(2)) = 2.5 x 10(6) M(-1) s(-1). A substrate deuterium isotope effect of 32 was measured for the k(cat)/K(m)(S), while a smaller, but significant value of 1.6-1.9 was observed on k(cat)/K(m)(O(2)). O-18 isotope effects of 1.0185 with either protiated or deuterated sugar, together with the absence of any solvent isotope effect, lead to the conclusion that hydrogen atom transfer from reduced cofactor to a Cu(II)-superoxo intermediate is fully rate-determining for k(cat)/K(m)(O(2)). The measured O-18 isotope effects provide corroborative evidence for the reactive superoxo species in the dopamine beta-monooxygenase/peptidylglycine alpha-hydroxylating monooxygenase family, as well as providing a frame of reference for copper-superoxo reactivity. The combination of solvent and substrate deuterium isotope effects rules out solvent deuterium exchange into reduced enzyme as the origin of the relatively small substrate deuterium isotope effect on k(cat)/K(m)(O(2)). These data indicate fundamental differences in the hydrogen transfer step from the carbon of substrate vs the oxygen of reduced cofactor during the reductive and oxidative half-reactions of galactose oxidase.

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Year:  2009        PMID: 19290629      PMCID: PMC2683747          DOI: 10.1021/ja807963e

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  29 in total

1.  Temperature-dependent isotope effects in soybean lipoxygenase-1: correlating hydrogen tunneling with protein dynamics.

Authors:  Michael J Knapp; Keith Rickert; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2002-04-17       Impact factor: 15.419

2.  Cu(I)-dependent biogenesis of the galactose oxidase redox cofactor.

Authors:  Mei M Whittaker; James W Whittaker
Journal:  J Biol Chem       Date:  2003-04-01       Impact factor: 5.157

3.  The active site of galactose oxidase.

Authors:  M M Whittaker; J W Whittaker
Journal:  J Biol Chem       Date:  1988-05-05       Impact factor: 5.157

4.  The stacking tryptophan of galactose oxidase: a second-coordination sphere residue that has profound effects on tyrosyl radical behavior and enzyme catalysis.

Authors:  Melanie S Rogers; Ejan M Tyler; Nana Akyumani; Christian R Kurtis; R Kate Spooner; Sarah E Deacon; Sarita Tamber; Susan J Firbank; Khaled Mahmoud; Peter F Knowles; Simon E V Phillips; Michael J McPherson; David M Dooley
Journal:  Biochemistry       Date:  2007-03-27       Impact factor: 3.162

Review 5.  Advances in studying bioinorganic reaction mechanisms: isotopic probes of activated oxygen intermediates in metalloenzymes.

Authors:  Justine P Roth
Journal:  Curr Opin Chem Biol       Date:  2007-02-16       Impact factor: 8.822

6.  The catalytic mechanism of peptidylglycine alpha-hydroxylating monooxygenase investigated by computer simulation.

Authors:  Alejandro Crespo; Marcelo A Martí; Adrian E Roitberg; L Mario Amzel; Darío A Estrin
Journal:  J Am Chem Soc       Date:  2006-10-04       Impact factor: 15.419

7.  Dioxygen binds end-on to mononuclear copper in a precatalytic enzyme complex.

Authors:  Sean T Prigge; Betty A Eipper; Richard E Mains; L Mario Amzel
Journal:  Science       Date:  2004-05-07       Impact factor: 47.728

Review 8.  Hydrogen tunneling and protein motion in enzyme reactions.

Authors:  Sharon Hammes-Schiffer
Journal:  Acc Chem Res       Date:  2006-02       Impact factor: 22.384

9.  Evidence that dioxygen and substrate activation are tightly coupled in dopamine beta-monooxygenase. Implications for the reactive oxygen species.

Authors:  John P Evans; Kyunghye Ahn; Judith P Klinman
Journal:  J Biol Chem       Date:  2003-09-09       Impact factor: 5.157

10.  Oxygen-18 kinetic isotope effects in the dopamine beta-monooxygenase reaction: evidence for a new chemical mechanism in non-heme metallomonooxygenases.

Authors:  G Tian; J A Berry; J P Klinman
Journal:  Biochemistry       Date:  1994-01-11       Impact factor: 3.162

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  12 in total

1.  Factors that control catalytic two- versus four-electron reduction of dioxygen by copper complexes.

Authors:  Shunichi Fukuzumi; Laleh Tahsini; Yong-Min Lee; Kei Ohkubo; Wonwoo Nam; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2012-04-12       Impact factor: 15.419

2.  CO and O2 binding to pseudo-tetradentate ligand-copper(I) complexes with a variable N-donor moiety: kinetic/thermodynamic investigation reveals ligand-induced changes in reaction mechanism.

Authors:  Heather R Lucas; Gerald J Meyer; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2010-09-22       Impact factor: 15.419

3.  A peroxynitrite complex of copper: formation from a copper-nitrosyl complex, transformation to nitrite and exogenous phenol oxidative coupling or nitration.

Authors:  Ga Young Park; Subramanian Deepalatha; Simona C Puiu; Dong-Heon Lee; Biplab Mondal; Amy A Narducci Sarjeant; Diego del Rio; Monita Y M Pau; Edward I Solomon; Kenneth D Karlin
Journal:  J Biol Inorg Chem       Date:  2009-08-07       Impact factor: 3.358

4.  Lewis acid-induced change from four- to two-electron reduction of dioxygen catalyzed by copper complexes using scandium triflate.

Authors:  Saya Kakuda; Clarence J Rolle; Kei Ohkubo; Maxime A Siegler; Kenneth D Karlin; Shunichi Fukuzumi
Journal:  J Am Chem Soc       Date:  2015-02-26       Impact factor: 15.419

5.  Temperature-independent catalytic two-electron reduction of dioxygen by ferrocenes with a copper(II) tris[2-(2-pyridyl)ethyl]amine catalyst in the presence of perchloric acid.

Authors:  Dipanwita Das; Yong-Min Lee; Kei Ohkubo; Wonwoo Nam; Kenneth D Karlin; Shunichi Fukuzumi
Journal:  J Am Chem Soc       Date:  2013-02-08       Impact factor: 15.419

Review 6.  The power of integrating kinetic isotope effects into the formalism of the Michaelis-Menten equation.

Authors:  Judith P Klinman
Journal:  FEBS J       Date:  2013-09-02       Impact factor: 5.542

7.  Stepwise protonation and electron-transfer reduction of a primary copper-dioxygen adduct.

Authors:  Ryan L Peterson; Jake W Ginsbach; Ryan E Cowley; Munzarin F Qayyum; Richard A Himes; Maxime A Siegler; Cathy D Moore; Britt Hedman; Keith O Hodgson; Shunichi Fukuzumi; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2013-11-06       Impact factor: 15.419

8.  Structural snapshots from the oxidative half-reaction of a copper amine oxidase: implications for O2 activation.

Authors:  Bryan J Johnson; Erik T Yukl; Valerie J Klema; Judith P Klinman; Carrie M Wilmot
Journal:  J Biol Chem       Date:  2013-08-12       Impact factor: 5.157

9.  Mechanistic insights into the oxidation of substituted phenols via hydrogen atom abstraction by a cupric-superoxo complex.

Authors:  Jung Yoon Lee; Ryan L Peterson; Kei Ohkubo; Isaac Garcia-Bosch; Richard A Himes; Julia Woertink; Cathy D Moore; Edward I Solomon; Shunichi Fukuzumi; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2014-07-08       Impact factor: 15.419

10.  Hydroperoxylation by hydroxyethylphosphonate dioxygenase.

Authors:  John T Whitteck; Robert M Cicchillo; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2009-11-11       Impact factor: 15.419

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