Literature DB >> 23940035

Structural snapshots from the oxidative half-reaction of a copper amine oxidase: implications for O2 activation.

Bryan J Johnson1, Erik T Yukl, Valerie J Klema, Judith P Klinman, Carrie M Wilmot.   

Abstract

The mechanism of molecular oxygen activation is the subject of controversy in the copper amine oxidase family. At their active sites, copper amine oxidases contain both a mononuclear copper ion and a protein-derived quinone cofactor. Proposals have been made for the activation of molecular oxygen via both a Cu(II)-aminoquinol catalytic intermediate and a Cu(I)-semiquinone intermediate. Using protein crystallographic freeze-trapping methods under low oxygen conditions combined with single-crystal microspectrophotometry, we have determined structures corresponding to the iminoquinone and semiquinone forms of the enzyme. Methylamine reduction at acidic or neutral pH has revealed protonated and deprotonated forms of the iminoquinone that are accompanied by a bound oxygen species that is likely hydrogen peroxide. However, methylamine reduction at pH 8.5 has revealed a copper-ligated cofactor proposed to be the semiquinone form. A copper-ligated orientation, be it the sole identity of the semiquinone or not, blocks the oxygen-binding site, suggesting that accessibility of Cu(I) may be the basis of partitioning O2 activation between the aminoquinol and Cu(I).

Entities:  

Keywords:  Copper; Enzyme Mechanisms; Oxidation-Reduction; Oxygen Binding; Quinones; Spectroscopy; X-ray Crystallography

Mesh:

Substances:

Year:  2013        PMID: 23940035      PMCID: PMC3784758          DOI: 10.1074/jbc.M113.501791

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  45 in total

1.  An unexpected role for the active site base in cofactor orientation and flexibility in the copper amine oxidase from Hansenula polymorpha.

Authors:  J Plastino; E L Green; J Sanders-Loehr; J P Klinman
Journal:  Biochemistry       Date:  1999-06-29       Impact factor: 3.162

Review 2.  CuI-semiquinone radical species in plant copper-amine oxidases.

Authors:  R Medda; A Padiglia; A Bellelli; J Z Pedersen; A F Agrò; G Floris
Journal:  FEBS Lett       Date:  1999-06-18       Impact factor: 4.124

3.  The oxidation and reduction reactions of bovine serum amine oxidase. A kinetic study.

Authors:  A Bellelli; L Morpurgo; B Mondovì; E Agostinelli
Journal:  Eur J Biochem       Date:  2000-06

4.  Irreversible inhibition of pig kidney copper-containing amine oxidase by sodium and lithium ions.

Authors:  A Padiglia; R Medda; A Lorrai; M Paci; J Z Pedersen; A Boffi; A Bellelli; A F Agrò; G Floris
Journal:  Eur J Biochem       Date:  2001-09

5.  Mechanisms Whereby Mononuclear Copper Proteins Functionalize Organic Substrates.

Authors:  Judith P. Klinman
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

Review 6.  Trihydroxyphenylalanine quinone (TPQ) from copper amine oxidases and lysyl tyrosylquinone (LTQ) from lysyl oxidase.

Authors:  J E Dove; J P Klinman
Journal:  Adv Protein Chem       Date:  2001

7.  Visualization of dioxygen bound to copper during enzyme catalysis.

Authors:  C M Wilmot; J Hajdu; M J McPherson; P F Knowles; S E Phillips
Journal:  Science       Date:  1999-11-26       Impact factor: 47.728

8.  Spectroscopic observation of intermediates formed during the oxidative half-reaction of copper/topa quinone-containing phenylethylamine oxidase.

Authors:  S Hirota; T Iwamoto; S Kishishita; T Okajima; O Yamauchi; K Tanizawa
Journal:  Biochemistry       Date:  2001-12-25       Impact factor: 3.162

Review 9.  Structure and biogenesis of topaquinone and related cofactors.

Authors:  D M Dooley
Journal:  J Biol Inorg Chem       Date:  1999-02       Impact factor: 3.358

10.  The role of copper in topa quinone biogenesis and catalysis, as probed by azide inhibition of a copper amine oxidase from yeast.

Authors:  B Schwartz; A K Olgin; J P Klinman
Journal:  Biochemistry       Date:  2001-03-06       Impact factor: 3.162

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  7 in total

1.  Small Molecule Lysyl Oxidase-like 2 (LOXL2) Inhibitors: The Identification of an Inhibitor Selective for LOXL2 over LOX.

Authors:  John H Hutchinson; Martin W Rowbottom; David Lonergan; Janice Darlington; Pat Prodanovich; Christopher D King; Jilly F Evans; Gretchen Bain
Journal:  ACS Med Chem Lett       Date:  2017-03-01       Impact factor: 4.345

2.  Probing the Catalytic Mechanism of Copper Amine Oxidase from Arthrobacter globiformis with Halide Ions.

Authors:  Takeshi Murakawa; Akio Hamaguchi; Shota Nakanishi; Misumi Kataoka; Tadashi Nakai; Yoshiaki Kawano; Hiroshi Yamaguchi; Hideyuki Hayashi; Katsuyuki Tanizawa; Toshihide Okajima
Journal:  J Biol Chem       Date:  2015-08-11       Impact factor: 5.157

Review 3.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

Review 4.  From protein structure to function via single crystal optical spectroscopy.

Authors:  Luca Ronda; Stefano Bruno; Stefano Bettati; Paola Storici; Andrea Mozzarelli
Journal:  Front Mol Biosci       Date:  2015-04-28

Review 5.  XFELs for structure and dynamics in biology.

Authors:  J C H Spence
Journal:  IUCrJ       Date:  2017-05-10       Impact factor: 4.769

6.  Copper amine oxidases catalyze the oxidative deamination and hydrolysis of cyclic imines.

Authors:  Toshiki Nagakubo; Takuto Kumano; Takehiro Ohta; Yoshiteru Hashimoto; Michihiko Kobayashi
Journal:  Nat Commun       Date:  2019-01-24       Impact factor: 14.919

7.  A Thioether-Ligated Cupric Superoxide Model with Hydrogen Atom Abstraction Reactivity.

Authors:  Mayukh Bhadra; Wesley J Transue; Hyeongtaek Lim; Ryan E Cowley; Jung Yoon C Lee; Maxime A Siegler; Patrick Josephs; Gerald Henkel; Markus Lerch; Siegfried Schindler; Adam Neuba; Keith O Hodgson; Britt Hedman; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2021-03-08       Impact factor: 15.419

  7 in total

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