Literature DB >> 19280223

A European network for virtual microscopy--design, implementation and evaluation of performance.

Mikael Lundin1, Janusz Szymas, Ewert Linder, Hans Beck, Peter de Wilde, Han van Krieken, Marcial García Rojo, Ignacio Moreno, Aurelio Ariza, Sitki Tuzlali, Sergülen Dervişoğlu, Heikki Helin, Veli-Pekka Lehto, Johan Lundin.   

Abstract

Web-based virtual microscopy has enabled new applications within pathology. Here, we introduce and evaluate a network of academic servers, designed to maximize image accessibility to users from all regions of Europe. Whole-slide imaging was utilized to digitize the entire slide set (n = 154) for the slide seminars of the 21st European Congress of Pathology. The virtual slides were mirrored to five academic servers across Europe using a novel propagation method. Functionality was implemented that automatically selects the fastest server connection in order to optimize the slide-viewing speed ( http://www.webmicroscope.net/ECP2007). Results show that during 6 months of monitoring the uptime of the network was 100%. The average viewing speed with the network was 3.1 Mbit/s, as compared to 1.9 Mbit/s using single servers. A good viewing speed (>2Mbit/s) was observed in 32 of 37 countries (86%), compared to 25 of 37 (68%) using single servers. Our study shows that implementing a virtual microscopy network spanning a large geographical area is technically feasible. By utilizing existing academic networks and cost-minimizing image compression, it is also economically feasible.

Mesh:

Year:  2009        PMID: 19280223     DOI: 10.1007/s00428-009-0749-3

Source DB:  PubMed          Journal:  Virchows Arch        ISSN: 0945-6317            Impact factor:   4.064


  11 in total

1.  Use of virtual microscopy for didactic live-audience presentation in anatomic pathology.

Authors:  David J Romer; Saul Suster
Journal:  Ann Diagn Pathol       Date:  2003-02       Impact factor: 2.090

2.  Digital slide and virtual microscopy based routine and telepathology evaluation of routine gastrointestinal biopsy specimens.

Authors:  B Molnar; L Berczi; C Diczhazy; A Tagscherer; S V Varga; B Szende; Z Tulassay
Journal:  J Clin Pathol       Date:  2003-06       Impact factor: 3.411

3.  Virtual microscopy.

Authors:  M Lundin; J Lundin; J Isola
Journal:  J Clin Pathol       Date:  2004-12       Impact factor: 3.411

4.  A digital atlas of breast histopathology: an application of web based virtual microscopy.

Authors:  M Lundin; J Lundin; H Helin; J Isola
Journal:  J Clin Pathol       Date:  2004-12       Impact factor: 3.411

5.  Resuscitating the teaching of anatomical pathology in undergraduate medical education: Web-based innovative clinicopathological cases.

Authors:  Alfred King Yin Lam; Jan Veitch; Richard Hays
Journal:  Pathology       Date:  2005-10       Impact factor: 5.306

6.  Web-based virtual microscopy in teaching and standardizing Gleason grading.

Authors:  Henrik Helin; Mikael Lundin; Johan Lundin; Paula Martikainen; Teuvo Tammela; Heikki Helin; Theo van der Kwast; Jorma Isola
Journal:  Hum Pathol       Date:  2005-04       Impact factor: 3.466

7.  A randomized controlled trial of the diagnostic accuracy of internet-based telepathology compared with conventional microscopy.

Authors:  P Furness
Journal:  Histopathology       Date:  2007-01       Impact factor: 5.087

8.  Application of virtual microscopy in clinical cytopathology.

Authors:  D M Steinberg; S Z Ali
Journal:  Diagn Cytopathol       Date:  2001-12       Impact factor: 1.582

9.  Grid technology in tissue-based diagnosis: fundamentals and potential developments.

Authors:  Jürgen Görtler; Martin Berghoff; Gian Kayser; Klaus Kayser
Journal:  Diagn Pathol       Date:  2006-08-24       Impact factor: 2.644

10.  Image standards in tissue-based diagnosis (diagnostic surgical pathology).

Authors:  Klaus Kayser; Jürgen Görtler; Torsten Goldmann; Ekkehard Vollmer; Peter Hufnagl; Gian Kayser
Journal:  Diagn Pathol       Date:  2008-04-18       Impact factor: 2.644

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  10 in total

1.  Using a visual discrimination model for the detection of compression artifacts in virtual pathology images.

Authors:  Jeffrey P Johnson; Elizabeth A Krupinski; Michelle Yan; Hans Roehrig; Anna R Graham; Ronald S Weinstein
Journal:  IEEE Trans Med Imaging       Date:  2010-09-23       Impact factor: 10.048

Review 2.  How parasitology is taught in medical faculties in Europe? Parasitology, lost?

Authors:  Fabrizio Bruschi
Journal:  Parasitol Res       Date:  2009-08-21       Impact factor: 2.289

3.  More technology, better learning resources, better learning? Lessons from adopting virtual microscopy in undergraduate medical education.

Authors:  Laura Helle; Markus Nivala; Pauliina Kronqvist
Journal:  Anat Sci Educ       Date:  2012-08-28       Impact factor: 5.958

4.  Grid computing in image analysis.

Authors:  Klaus Kayser; Jürgen Görtler; Stephan Borkenfeld; Gian Kayser
Journal:  Diagn Pathol       Date:  2011       Impact factor: 2.644

5.  Traditional microscopy instruction versus process-oriented virtual microscopy instruction: a naturalistic experiment with control group.

Authors:  Laura Helle; Markus Nivala; Pauliina Kronqvist; Andreas Gegenfurtner; Pasi Björk; Roger Säljö
Journal:  Diagn Pathol       Date:  2011-03-30       Impact factor: 2.644

6.  How to measure diagnosis-associated information in virtual slides.

Authors:  Klaus Kayser; Jürgen Görtler; Stephan Borkenfeld; Gian Kayser
Journal:  Diagn Pathol       Date:  2011-03-30       Impact factor: 2.644

7.  Interactive and automated application of virtual microscopy.

Authors:  Klaus Kayser; Jürgen Görtler; Stephan Borkenfeld; Gian Kayser
Journal:  Diagn Pathol       Date:  2011-03-30       Impact factor: 2.644

8.  Whole slide imaging for educational purposes.

Authors:  Liron Pantanowitz; Janusz Szymas; Yukako Yagi; David Wilbur
Journal:  J Pathol Inform       Date:  2012-12-20

9.  On-chip imaging of Schistosoma haematobium eggs in urine for diagnosis by computer vision.

Authors:  Ewert Linder; Anne Grote; Sami Varjo; Nina Linder; Marianne Lebbad; Mikael Lundin; Vinod Diwan; Jari Hannuksela; Johan Lundin
Journal:  PLoS Negl Trop Dis       Date:  2013-12-05

10.  Clinical Neuropathology Views - 2/2016: Digital networking in European neuropathology: An initiative to facilitate truly interactive consultations.

Authors:  Miguel A Idoate; Marcial García-Rojo
Journal:  Clin Neuropathol       Date:  2016 Mar-Apr       Impact factor: 1.368

  10 in total

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