Literature DB >> 19246004

Thiopeptide biosynthesis featuring ribosomally synthesized precursor peptides and conserved posttranslational modifications.

Rijing Liao1, Lian Duan, Chun Lei, Haixue Pan, Ying Ding, Qi Zhang, Daijie Chen, Ben Shen, Yi Yu, Wen Liu.   

Abstract

Thiopeptides, with potent activity against various drug-resistant pathogens, contain a characteristic macrocyclic core consisting of multiple thiazoles, dehydroamino acids, and a 6-membered nitrogen heterocycle. Their biosynthetic pathways remain elusive, in spite of great efforts by in vivo feeding experiments. Here, cloning, sequencing, and characterization of the thiostrepton and siomycin A gene clusters unveiled a biosynthetic paradigm for the thiopeptide specific core formation, featuring ribosomally synthesized precursor peptides and conserved posttranslational modifications. The paradigm generality for thiopeptide biosynthesis was supported by genome mining and ultimate confirmation of the thiocillin I production in Bacillus cereus ATCC 14579, a strain that was previously unknown as a thiopeptide producer. These findings set the stage to accelerate the discovery of thiopeptides by prediction at the genetic level and to generate structural diversity by applying combinatorial biosynthesis methods.

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Year:  2009        PMID: 19246004      PMCID: PMC2676563          DOI: 10.1016/j.chembiol.2009.01.007

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  20 in total

Review 1.  From amino acids to heteroaromatics--thiopeptide antibiotics, nature's heterocyclic peptides.

Authors:  Rachael A Hughes; Christopher J Moody
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

2.  Discovery of a widely distributed toxin biosynthetic gene cluster.

Authors:  Shaun W Lee; Douglas A Mitchell; Andrew L Markley; Mary E Hensler; David Gonzalez; Aaron Wohlrab; Pieter C Dorrestein; Victor Nizet; Jack E Dixon
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-28       Impact factor: 11.205

3.  1H NMR spectral evidence for the structure and conformation of peptide antibiotic siomycin-A.

Authors:  K Tori; K Tokura; Y Yoshimura; K Okabe; H Otsuka; F Inagski; T Miyazawa
Journal:  J Antibiot (Tokyo)       Date:  1979-10       Impact factor: 2.649

4.  From peptide precursors to oxazole and thiazole-containing peptide antibiotics: microcin B17 synthase.

Authors:  Y M Li; J C Milne; L L Madison; R Kolter; C T Walsh
Journal:  Science       Date:  1996-11-15       Impact factor: 47.728

5.  Total synthesis of thiostrepton. Retrosynthetic analysis and construction of key building blocks.

Authors:  K C Nicolaou; Brian S Safina; Mark Zak; Sang Hyup Lee; Marta Nevalainen; Marco Bella; Anthony A Estrada; Christian Funke; Frédéric J Zécri; Stephan Bulat
Journal:  J Am Chem Soc       Date:  2005-08-10       Impact factor: 15.419

6.  Total synthesis of thiostrepton. Assembly of key building blocks and completion of the synthesis.

Authors:  K C Nicolaou; Mark Zak; Brian S Safina; Anthony A Estrada; Sang Hyup Lee; Marta Nevalainen
Journal:  J Am Chem Soc       Date:  2005-08-10       Impact factor: 15.419

7.  Isolation of three new antibiotics, thiocillins I, II and III, related to micrococcin P. Studies on antibiotics from the genus Bacillus. VIII.

Authors:  J Shoji; H Hinoo; Y Wakisaka; K Koizumi; M Mayama
Journal:  J Antibiot (Tokyo)       Date:  1976-04       Impact factor: 2.649

8.  Studies on the biosynthesis of thiostrepton: 4-(1-hydroxyethyl)quinoline-2-carboxylate as a free intermediate on the pathway to the quinaldic acid moiety.

Authors:  N D Priestley; T M Smith; P R Shipley; H G Floss
Journal:  Bioorg Med Chem       Date:  1996-07       Impact factor: 3.641

9.  Structural studies on thiocillins I, II and III (studies on antibiotics from the genus Bacillus XXIX).

Authors:  J Shoji; T Kato; Y Yoshimura; K Tori
Journal:  J Antibiot (Tokyo)       Date:  1981-09       Impact factor: 2.649

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  75 in total

1.  Manipulation of thiocillin variants by prepeptide gene replacement: structure, conformation, and activity of heterocycle substitution mutants.

Authors:  Albert A Bowers; Michael G Acker; Alexander Koglin; Christopher T Walsh
Journal:  J Am Chem Soc       Date:  2010-06-02       Impact factor: 15.419

2.  Isolation and characterization of the gene cluster for biosynthesis of the thiopeptide antibiotic TP-1161.

Authors:  Kerstin Engelhardt; Kristin F Degnes; Sergey B Zotchev
Journal:  Appl Environ Microbiol       Date:  2010-09-17       Impact factor: 4.792

Review 3.  Avoidance of suicide in antibiotic-producing microbes.

Authors:  Eric Cundliffe; Arnold L Demain
Journal:  J Ind Microbiol Biotechnol       Date:  2010-05-06       Impact factor: 3.346

4.  Production of a new thiopeptide antibiotic, TP-1161, by a marine Nocardiopsis species.

Authors:  Kerstin Engelhardt; Kristin F Degnes; Michael Kemmler; Harald Bredholt; Espen Fjaervik; Geir Klinkenberg; Håvard Sletta; Trond E Ellingsen; Sergey B Zotchev
Journal:  Appl Environ Microbiol       Date:  2010-06-18       Impact factor: 4.792

5.  Characterization of a novel plasmid-borne thiopeptide gene cluster in Staphylococcus epidermidis strain 115.

Authors:  Philip R Bennallack; Scott R Burt; Michael J Heder; Richard A Robison; Joel S Griffitts
Journal:  J Bacteriol       Date:  2014-10-13       Impact factor: 3.490

6.  Mutagenesis of the thiostrepton precursor peptide at Thr7 impacts both biosynthesis and function.

Authors:  Chaoxuan Li; Feifei Zhang; Wendy L Kelly
Journal:  Chem Commun (Camb)       Date:  2011-11-08       Impact factor: 6.222

7.  Plantazolicin, a novel microcin B17/streptolysin S-like natural product from Bacillus amyloliquefaciens FZB42.

Authors:  Romy Scholz; Katie J Molohon; Jonny Nachtigall; Joachim Vater; Andrew L Markley; Roderich D Süssmuth; Douglas A Mitchell; Rainer Borriss
Journal:  J Bacteriol       Date:  2010-10-22       Impact factor: 3.490

Review 8.  Genome mining for ribosomally synthesized natural products.

Authors:  Juan E Velásquez; Wilfred A van der Donk
Journal:  Curr Opin Chem Biol       Date:  2010-11-20       Impact factor: 8.822

9.  NosA catalyzing carboxyl-terminal amide formation in nosiheptide maturation via an enamine dealkylation on the serine-extended precursor peptide.

Authors:  Yi Yu; Heng Guo; Qi Zhang; Lian Duan; Ying Ding; Rijing Liao; Chun Lei; Ben Shen; Wen Liu
Journal:  J Am Chem Soc       Date:  2010-11-03       Impact factor: 15.419

10.  In vitro activity of the nisin dehydratase NisB.

Authors:  Neha Garg; Luis M A Salazar-Ocampo; Wilfred A van der Donk
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-15       Impact factor: 11.205

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