Literature DB >> 23589847

In vitro activity of the nisin dehydratase NisB.

Neha Garg1, Luis M A Salazar-Ocampo, Wilfred A van der Donk.   

Abstract

The biosynthesis of several classes of ribosomally synthesized and posttranslationally modified peptides involves dehydration of serine and threonine residues. For class I lantibiotics, thiopeptides, and goadsporin, this dehydration is catalyzed by lanthionine biosynthetic enzyme B (LanB) or LanB-like proteins. Although LanB proteins have been studied since 1992, in vitro reconstitution of their dehydration activity has been elusive. We show here the in vitro activity of the dehydratase involved in the biosynthesis of the food preservative nisin (NisB). In vitro, NisB dehydrated its substrate peptide NisA eight times in the presence of glutamate, ATP, Mg(2+), and the ribosomal/membrane fraction of bacterial cell extract. Mutation of 23 highly conserved residues of NisB identified a number of amino acids that are essential for dehydration activity. In addition, these mutagenesis studies identified three mutants, R786A, R826A, and H961A, that result in multiple glutamylations of the NisA substrate. Glutamylation was observed during both Escherichia coli coexpression of NisA with these mutants and in vitro assays. Treatment of the glutamylated substrate with WT NisB results in dehydrated NisA, suggesting that the glutamylated peptide is an intermediate in dehydration. Collectively, these studies suggest that dehydration involves glutamylation of the side chains of Ser and Thr followed by elimination. The latter step has precedent in the virginiamycin resistance protein virginiamycin B lyase. These studies will facilitate investigation of other LanB proteins involved in the biosynthesis of lantibiotics, thiopeptides, and goadsporin.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23589847      PMCID: PMC3645518          DOI: 10.1073/pnas.1222488110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  Vgb from Staphylococcus aureus inactivates streptogramin B antibiotics by an elimination mechanism not hydrolysis.

Authors:  T A Mukhtar; K P Koteva; D W Hughes; G D Wright
Journal:  Biochemistry       Date:  2001-07-31       Impact factor: 3.162

2.  NisB is required for the dehydration and NisC for the lanthionine formation in the post-translational modification of nisin.

Authors:  Olli Koponen; Marja Tolonen; Mingqiang Qiao; Gudrun Wahlström; Jari Helin; Per E J Saris
Journal:  Microbiology       Date:  2002-11       Impact factor: 2.777

3.  Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli.

Authors:  Bryson D Bennett; Elizabeth H Kimball; Melissa Gao; Robin Osterhout; Stephen J Van Dien; Joshua D Rabinowitz
Journal:  Nat Chem Biol       Date:  2009-06-28       Impact factor: 15.040

4.  Mimicking the Escherichia coli cytoplasmic environment activates long-lived and efficient cell-free protein synthesis.

Authors:  Michael C Jewett; James R Swartz
Journal:  Biotechnol Bioeng       Date:  2004-04-05       Impact factor: 4.530

5.  Preparation of Escherichia coli cell extract for highly productive cell-free protein expression.

Authors:  Takanori Kigawa; Takashi Yabuki; Natsuko Matsuda; Takayoshi Matsuda; Rie Nakajima; Akiko Tanaka; Shigeyuki Yokoyama
Journal:  J Struct Funct Genomics       Date:  2004

6.  Thiostrepton biosynthesis: prototype for a new family of bacteriocins.

Authors:  Wendy L Kelly; Lisa Pan; Chaoxuan Li
Journal:  J Am Chem Soc       Date:  2009-04-01       Impact factor: 15.419

7.  Lacticin 481: in vitro reconstitution of lantibiotic synthetase activity.

Authors:  Lili Xie; Leah M Miller; Champak Chatterjee; Olga Averin; Neil L Kelleher; Wilfred A van der Donk
Journal:  Science       Date:  2004-01-30       Impact factor: 47.728

8.  Biosynthesis of the lantibiotic nisin: genomic organization and membrane localization of the NisB protein.

Authors:  G Engelke; Z Gutowski-Eckel; M Hammelmann; K D Entian
Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

9.  Ribosomally synthesized thiopeptide antibiotics targeting elongation factor Tu.

Authors:  Rowan P Morris; Jennifer A Leeds; Hans Ulrich Naegeli; Lukas Oberer; Klaus Memmert; Eric Weber; Matthew J LaMarche; Christian N Parker; Nathalie Burrer; Stacey Esterow; Andreas E Hein; Esther K Schmitt; Philipp Krastel
Journal:  J Am Chem Soc       Date:  2009-04-29       Impact factor: 15.419

10.  Distributive and directional behavior of lantibiotic synthetases revealed by high-resolution tandem mass spectrometry.

Authors:  M Violet Lee; Leigh Anne Furgerson Ihnken; Young Ok You; Amanda L McClerren; Wilfred A van der Donk; Neil L Kelleher
Journal:  J Am Chem Soc       Date:  2009-09-02       Impact factor: 15.419

View more
  48 in total

1.  Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB.

Authors:  Manuel A Ortega; Yue Hao; Qi Zhang; Mark C Walker; Wilfred A van der Donk; Satish K Nair
Journal:  Nature       Date:  2014-10-26       Impact factor: 49.962

Review 2.  Insights into the evolution of lanthipeptide biosynthesis.

Authors:  Yi Yu; Qi Zhang; Wilfred A van der Donk
Journal:  Protein Sci       Date:  2013-09-18       Impact factor: 6.725

Review 3.  Mechanistic Understanding of Lanthipeptide Biosynthetic Enzymes.

Authors:  Lindsay M Repka; Jonathan R Chekan; Satish K Nair; Wilfred A van der Donk
Journal:  Chem Rev       Date:  2017-01-30       Impact factor: 60.622

4.  Capture of micrococcin biosynthetic intermediates reveals C-terminal processing as an obligatory step for in vivo maturation.

Authors:  Kathryn D Bewley; Philip R Bennallack; Mark A Burlingame; Richard A Robison; Joel S Griffitts; Susan M Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

5.  Structural investigation of ribosomally synthesized natural products by hypothetical structure enumeration and evaluation using tandem MS.

Authors:  Qi Zhang; Manuel Ortega; Yanxiang Shi; Huan Wang; Joel O Melby; Weixin Tang; Douglas A Mitchell; Wilfred A van der Donk
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-04       Impact factor: 11.205

6.  O-Methyltransferase-Mediated Incorporation of a β-Amino Acid in Lanthipeptides.

Authors:  Jeella Z Acedo; Ian R Bothwell; Linna An; Abby Trouth; Clara Frazier; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2019-10-15       Impact factor: 15.419

7.  Incorporation of Nonproteinogenic Amino Acids in Class I and II Lantibiotics.

Authors:  Nidhi Kakkar; Jessica G Perez; Wenshe R Liu; Michael C Jewett; Wilfred A van der Donk
Journal:  ACS Chem Biol       Date:  2018-02-21       Impact factor: 5.100

8.  Structure and tRNA Specificity of MibB, a Lantibiotic Dehydratase from Actinobacteria Involved in NAI-107 Biosynthesis.

Authors:  Manuel A Ortega; Yue Hao; Mark C Walker; Stefano Donadio; Margherita Sosio; Satish K Nair; Wilfred A van der Donk
Journal:  Cell Chem Biol       Date:  2016-02-11       Impact factor: 8.116

9.  Pseudomycoicidin, a Class II Lantibiotic from Bacillus pseudomycoides.

Authors:  Shradha Basi-Chipalu; Jasmin Dischinger; Michaele Josten; Christiane Szekat; Annegret Zweynert; Hans-Georg Sahl; Gabriele Bierbaum
Journal:  Appl Environ Microbiol       Date:  2015-03-13       Impact factor: 4.792

Review 10.  The many roles of glutamate in metabolism.

Authors:  Mark C Walker; Wilfred A van der Donk
Journal:  J Ind Microbiol Biotechnol       Date:  2015-09-01       Impact factor: 3.346

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.