Literature DB >> 19241374

Solution structure of the cysteine-rich domain in Fn14, a member of the tumor necrosis factor receptor superfamily.

Fahu He1, Weirong Dang, Kohei Saito, Satoru Watanabe, Naohiro Kobayashi, Peter Güntert, Takanori Kigawa, Akiko Tanaka, Yutaka Muto, Shigeyuki Yokoyama.   

Abstract

Fn14 is the smallest member of the n class="Disease">tumor necrosis factor (TNF) receptor superfamily, and specifically binds to its ligand, TWEAK (TNF-like weak inducer of apoptosis), which is a member of the TNF superfamily. The receptor-ligand recognition between Fn14 and TWEAK induces a variety of cellular processes for tissue remodeling and is also involved in the pathogenesis of some human diseases, such as cancer, chronic autoimmune diseases, and acute ischaemic stroke. The extracellular ligand-binding region of Fn14 is composed of 53 amino acid residues and forms a single, cysteine-rich domain (CRD). In this study, we determined the solution structure of the Fn14 CRD (Glu28-Ala70) by heteronuclear NMR, with a (13)C-/(15)N-labeled sample. The tertiary structure of the CRD comprises a beta-sheet with two strands, followed by a 3(10) helix and a C-terminal alpha-helix, and is stabilized by three disulfide bonds connecting Cys36-Cys49, Cys52-Cys67, and Cys55-Cys64. Comparison of the disulfide bond connectivities and the tertiary structures with those of other CRDs revealed that the Fn14 CRD is similar to the fourth CRD of TNF receptor 1 (A1-C2 module type), but not to the CRD of B-cell maturation antigen and the second CRD of transmembrane activator and CAML (calcium modulator and cyclophilin ligand) interactor (A1-D2 module type). This is the first structural report about the A1-C2 type CRD that could bind to the known target.

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Year:  2009        PMID: 19241374      PMCID: PMC2760370          DOI: 10.1002/pro.49

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  38 in total

1.  Structure of the TRAIL-DR5 complex reveals mechanisms conferring specificity in apoptotic initiation.

Authors:  J Mongkolsapaya; J M Grimes; N Chen; X N Xu; D I Stuart; E Y Jones; G R Screaton
Journal:  Nat Struct Biol       Date:  1999-11

2.  Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA.

Authors:  Torsten Herrmann; Peter Güntert; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2002-05-24       Impact factor: 5.469

3.  Structures of the extracellular domain of the type I tumor necrosis factor receptor.

Authors:  J H Naismith; T Q Devine; T Kohno; S R Sprang
Journal:  Structure       Date:  1996-11-15       Impact factor: 5.006

4.  13C NMR chemical shifts can predict disulfide bond formation.

Authors:  D Sharma; K Rajarathnam
Journal:  J Biomol NMR       Date:  2000-10       Impact factor: 2.835

5.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  Torsion angle dynamics for NMR structure calculation with the new program DYANA.

Authors:  P Güntert; C Mumenthaler; K Wüthrich
Journal:  J Mol Biol       Date:  1997-10-17       Impact factor: 5.469

Review 8.  TWEAK and Fn14: new molecular targets for cancer therapy?

Authors:  Jeffrey A Winkles; Nhan L Tran; Michael E Berens
Journal:  Cancer Lett       Date:  2006-04-08       Impact factor: 8.679

Review 9.  Tumor necrosis factor family ligand-receptor binding.

Authors:  Gongyi Zhang
Journal:  Curr Opin Struct Biol       Date:  2004-04       Impact factor: 6.809

10.  TWEAK binding to the Fn14 cysteine-rich domain depends on charged residues located in both the A1 and D2 modules.

Authors:  Sharron A N Brown; Heather N Hanscom; Hong Vu; Shelesa A Brew; Jeffrey A Winkles
Journal:  Biochem J       Date:  2006-07-15       Impact factor: 3.857

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  13 in total

1.  Structural basis and targeting of the interaction between fibroblast growth factor-inducible 14 and tumor necrosis factor-like weak inducer of apoptosis.

Authors:  Harshil Dhruv; Joseph C Loftus; Pooja Narang; Joachim L Petit; Maureen Fameree; Julien Burton; Giresse Tchegho; Donald Chow; Holly Yin; Yousef Al-Abed; Michael E Berens; Nhan L Tran; Nathalie Meurice
Journal:  J Biol Chem       Date:  2013-09-20       Impact factor: 5.157

2.  In vitro and in silico interaction of porcine α-amylase with Vicia faba crude seed extract and evaluation of antidiabetic activity.

Authors:  Dhiraj Kumar Choudhary; Abha Mishra
Journal:  Bioengineered       Date:  2016-10-28       Impact factor: 3.269

3.  Exploring in silico affinity of flavonoids and tannins to human fibroblast growth factorinducible14 (Fn14), a member of TNF receptor super family.

Authors:  Cvs Siva Prasad; Madhu Bala
Journal:  Bioinformation       Date:  2013-07-12

Review 4.  The TWEAK/Fn14/CD163 axis-implications for metabolic disease.

Authors:  Wiktoria Ratajczak; Sarah D Atkinson; Catriona Kelly
Journal:  Rev Endocr Metab Disord       Date:  2021-09-20       Impact factor: 9.306

Review 5.  TWEAK and the progression of renal disease: clinical translation.

Authors:  Ana B Sanz; M Concepcion Izquierdo; Maria Dolores Sanchez-Niño; Alvaro C Ucero; Jesus Egido; Marta Ruiz-Ortega; Adrián Mario Ramos; Chaim Putterman; Alberto Ortiz
Journal:  Nephrol Dial Transplant       Date:  2014-02       Impact factor: 5.992

6.  Binding efficiency of protein-protein complexes.

Authors:  Eric S Day; Shaun M Cote; Adrian Whitty
Journal:  Biochemistry       Date:  2012-11-01       Impact factor: 3.162

Review 7.  Principles of antibody-mediated TNF receptor activation.

Authors:  H Wajant
Journal:  Cell Death Differ       Date:  2015-08-21       Impact factor: 15.828

8.  TWEAK/Fn14 Axis-Targeted Therapeutics: Moving Basic Science Discoveries to the Clinic.

Authors:  Emily Cheng; Cheryl L Armstrong; Rebeca Galisteo; Jeffrey A Winkles
Journal:  Front Immunol       Date:  2013-12-23       Impact factor: 7.561

9.  TWEAK-independent Fn14 self-association and NF-κB activation is mediated by the C-terminal region of the Fn14 cytoplasmic domain.

Authors:  Sharron A N Brown; Emily Cheng; Mark S Williams; Jeffrey A Winkles
Journal:  PLoS One       Date:  2013-06-04       Impact factor: 3.240

10.  Crystal structure of human TWEAK in complex with the Fab fragment of a neutralizing antibody reveals insights into receptor binding.

Authors:  Alfred Lammens; Monika Baehner; Ulrich Kohnert; Jens Niewoehner; Leopold von Proff; Michael Schraeml; Katja Lammens; Karl-Peter Hopfner
Journal:  PLoS One       Date:  2013-05-08       Impact factor: 3.240

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