Literature DB >> 19208622

Characterization of a selective inhibitor of inositol hexakisphosphate kinases: use in defining biological roles and metabolic relationships of inositol pyrophosphates.

Usha Padmanabhan1, D Eric Dollins, Peter C Fridy, John D York, C Peter Downes.   

Abstract

Inositol hexakisphosphate kinases (IP6Ks) phosphorylate inositol hexakisphosphate (InsP(6)) to yield 5-diphosphoinositol pentakisphosphate (5-[PP]-InsP(5) or InsP(7)). In this study, we report the characterization of a selective inhibitor, N(2)-(m-(trifluoromethy)lbenzyl) N(6)-(p-nitrobenzyl)purine (TNP), for these enzymes. TNP dose-dependently and selectively inhibited the activity of IP6K in vitro and inhibited InsP(7) and InsP(8) synthesis in vivo without affecting levels of other inositol phosphates. TNP did not inhibit either human or yeast Vip/PPIP5K, a newly described InsP(6)/InsP(7) 1/3-kinase. Overexpression of IP6K1, -2, or -3 in cells rescued TNP inhibition of InsP(7) synthesis. TNP had no effect on the activity of a large number of protein kinases, suggesting that it is selective for IP6Ks. TNP reversibly reduced InsP(7)/InsP(8) levels. TNP in combination with genetic studies was used to implicate the involvement of two pathways for synthesis of InsP(8) in yeast. TNP induced a fragmented vacuole phenotype in yeast, consistent with inhibition of Kcs1, a Saccharomyces cerevisiae IP6K. In addition, it also inhibited insulin release from Min6 cells in a dose-dependent manner further implicating InsP(7) in this process. TNP thus provides a means of selectively and rapidly modulating cellular InsP(7) levels, providing a new and versatile tool to study the biological function and metabolic relationships of inositol pyrophosphates.

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Year:  2009        PMID: 19208622      PMCID: PMC2667744          DOI: 10.1074/jbc.M900752200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  36 in total

1.  Identification and characterization of a novel inositol hexakisphosphate kinase.

Authors:  A Saiardi; E Nagata; H R Luo; A M Snowman; S H Snyder
Journal:  J Biol Chem       Date:  2001-08-13       Impact factor: 5.157

2.  Purine-based inhibitors of inositol-1,4,5-trisphosphate-3-kinase.

Authors:  Young-Tae Chang; Gildon Choi; Yoe-Sik Bae; Matthew Burdett; Ho-Sang Moon; Jae Wook Lee; Nathanael S Gray; Peter G Schultz; Laurent Meijer; Sung-Kee Chung; Kwan Yong Choi; Pann-Ghill Suh; Sung Ho Ryu
Journal:  Chembiochem       Date:  2002-09-02       Impact factor: 3.164

3.  The inositol hexakisphosphate kinase family. Catalytic flexibility and function in yeast vacuole biogenesis.

Authors:  A Saiardi; J J Caffrey; S H Snyder; S B Shears
Journal:  J Biol Chem       Date:  2000-08-11       Impact factor: 5.157

4.  Specificity and mechanism of action of some commonly used protein kinase inhibitors.

Authors:  S P Davies; H Reddy; M Caivano; P Cohen
Journal:  Biochem J       Date:  2000-10-01       Impact factor: 3.857

5.  Synthesis of diphosphoinositol pentakisphosphate by a newly identified family of higher inositol polyphosphate kinases.

Authors:  A Saiardi; H Erdjument-Bromage; A M Snowman; P Tempst; S H Snyder
Journal:  Curr Biol       Date:  1999-11-18       Impact factor: 10.834

6.  Modulation of ATP-dependent chromatin-remodeling complexes by inositol polyphosphates.

Authors:  Xuetong Shen; Hua Xiao; Ryan Ranallo; Wei-Hua Wu; Carl Wu
Journal:  Science       Date:  2002-11-14       Impact factor: 47.728

7.  Regulation of chromatin remodeling by inositol polyphosphates.

Authors:  David J Steger; Elizabeth S Haswell; Aimee L Miller; Susan R Wente; Erin K O'Shea
Journal:  Science       Date:  2002-11-14       Impact factor: 47.728

8.  Mammalian inositol polyphosphate multikinase synthesizes inositol 1,4,5-trisphosphate and an inositol pyrophosphate.

Authors:  A Saiardi; E Nagata; H R Luo; A Sawa; X Luo; A M Snowman; S H Snyder
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

9.  In Saccharomyces cerevisiae, the inositol polyphosphate kinase activity of Kcs1p is required for resistance to salt stress, cell wall integrity, and vacuolar morphogenesis.

Authors:  Evelyne Dubois; Bart Scherens; Fabienne Vierendeels; Melisa M W Ho; Francine Messenguy; Stephen B Shears
Journal:  J Biol Chem       Date:  2002-04-15       Impact factor: 5.157

10.  The human homolog of the rat inositol phosphate multikinase is an inositol 1,3,4,6-tetrakisphosphate 5-kinase.

Authors:  Shao-Chun Chang; Aimee L Miller; Yucheng Feng; Susan R Wente; Philip W Majerus
Journal:  J Biol Chem       Date:  2002-09-09       Impact factor: 5.157

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  55 in total

1.  Understanding inositol pyrophosphate metabolism and function: kinetic characterization of the DIPPs.

Authors:  Rajagopal S Kilari; Jeremy D Weaver; Stephen B Shears; Stephen T Safrany
Journal:  FEBS Lett       Date:  2013-09-08       Impact factor: 4.124

Review 2.  Diphosphoinositol polyphosphates: what are the mechanisms?

Authors:  Stephen B Shears; Nikhil A Gokhale; Huanchen Wang; Angelika Zaremba
Journal:  Adv Enzyme Regul       Date:  2010-10-28

3.  Inositol pyrophosphates mediate the DNA-PK/ATM-p53 cell death pathway by regulating CK2 phosphorylation of Tti1/Tel2.

Authors:  Feng Rao; Jiyoung Cha; Jing Xu; Risheng Xu; M Scott Vandiver; Richa Tyagi; Robert Tokhunts; Michael A Koldobskiy; Chenglai Fu; Roxanne Barrow; Mingxuan Wu; Dorothea Fiedler; James C Barrow; Solomon H Snyder
Journal:  Mol Cell       Date:  2014-03-20       Impact factor: 17.970

4.  Inhibition of Inositol Polyphosphate Kinases by Quercetin and Related Flavonoids: A Structure-Activity Analysis.

Authors:  Chunfang Gu; Michael A Stashko; Ana C Puhl-Rubio; Molee Chakraborty; Anutosh Chakraborty; Stephen V Frye; Kenneth H Pearce; Xiaodong Wang; Stephen B Shears; Huanchen Wang
Journal:  J Med Chem       Date:  2019-01-25       Impact factor: 7.446

5.  Neuronal migration is mediated by inositol hexakisphosphate kinase 1 via α-actinin and focal adhesion kinase.

Authors:  Chenglai Fu; Jing Xu; Weiwei Cheng; Tomas Rojas; Alfred C Chin; Adele M Snowman; Maged M Harraz; Solomon H Snyder
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-02       Impact factor: 11.205

6.  IP6K structure and the molecular determinants of catalytic specificity in an inositol phosphate kinase family.

Authors:  Huanchen Wang; Eugene F DeRose; Robert E London; Stephen B Shears
Journal:  Nat Commun       Date:  2014-06-24       Impact factor: 14.919

7.  Receptor-dependent compartmentalization of PPIP5K1, a kinase with a cryptic polyphosphoinositide binding domain.

Authors:  Nikhil A Gokhale; Angelika Zaremba; Stephen B Shears
Journal:  Biochem J       Date:  2011-03-15       Impact factor: 3.857

8.  Suramin and NF449 are IP5K inhibitors that disrupt inositol hexakisphosphate-mediated regulation of cullin-RING ligase and sensitize cancer cells to MLN4924/pevonedistat.

Authors:  Xiaozhe Zhang; Shaodong Shi; Yang Su; Xiaoli Yang; Sining He; Xiuyan Yang; Jing Wu; Jian Zhang; Feng Rao
Journal:  J Biol Chem       Date:  2020-06-03       Impact factor: 5.157

9.  The regulation of runt-related transcription factor 2 by fibroblast growth factor-2 and connexin43 requires the inositol polyphosphate/protein kinase Cδ cascade.

Authors:  Corinne Niger; Maria A Luciotti; Atum M Buo; Carla Hebert; Vy Ma; Joseph P Stains
Journal:  J Bone Miner Res       Date:  2013-06       Impact factor: 6.741

10.  Inositol Hexakisphosphate Kinase 1 (IP6K1) Regulates Inositol Synthesis in Mammalian Cells.

Authors:  Wenxi Yu; Cunqi Ye; Miriam L Greenberg
Journal:  J Biol Chem       Date:  2016-03-07       Impact factor: 5.157

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