Literature DB >> 31763120

Progress toward sourcing plants for new bioconjugation tools: a screening evaluation of a model peptide ligase using a synthetic precursor.

Tunjung Mahatmanto1,2,3, Isyatul Azizah2,4, Alex Buchberger2,5, Nicholas Stephanopoulos2,5.   

Abstract

In the present study, leaves from 39 phylogenetically distant plant species were sampled and screened for asparaginyl endopeptidase ligase activity using mass spectrometry to test the generality of peptide ligases in plants. A modified version of the sunflower trypsin inhibitor-1 precursor was used as the substrate for reactions with leaf crude extracts and protein fractions. Masses consistent with products of asparaginyl endopeptidase activities that cleave and ligate the substrate into cyclic peptide following the reactions were detected in 8 plants: Nerium oleander and Thevetia peruviana of the family Apocynaceae; Bauhinia variegata, Dermatophyllum secundiflorum, Pithecellobium flexicaule, and Prosopis chilensis of the family Fabaceae; Morus alba of the family Moraceae; and Citrus aurantium of the family Rutaceae. This screening result represents a 20% hit rate for finding asparaginyl endopeptidase ligase activity from the arbitrary plants sampled. Analysis following a 2-h reaction of the substrate with the crude extract of D. secundiflorum leaves showed that the yield of cyclic peptide remained stable around 0.5 ± 0.1% of the substrate over the course of the reaction. © King Abdulaziz City for Science and Technology 2019.

Entities:  

Keywords:  Asparaginyl endopeptidase; Bioconjugation tool; Cyclic peptide; Plant peptide ligase; Protein modification

Year:  2019        PMID: 31763120      PMCID: PMC6842375          DOI: 10.1007/s13205-019-1983-2

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  42 in total

1.  Plant cyclotides: A unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif.

Authors:  D J Craik; N L Daly; T Bond; C Waine
Journal:  J Mol Biol       Date:  1999-12-17       Impact factor: 5.469

2.  Structural analysis of asparaginyl endopeptidase reveals the activation mechanism and a reversible intermediate maturation stage.

Authors:  Lixia Zhao; Tian Hua; Christopher Crowley; Heng Ru; Xiangmin Ni; Neil Shaw; Lianying Jiao; Wei Ding; Lu Qu; Li-Wei Hung; Wei Huang; Lei Liu; Keqiang Ye; Songying Ouyang; Genhong Cheng; Zhi-Jie Liu
Journal:  Cell Res       Date:  2014-01-10       Impact factor: 25.617

3.  The evolution of Momordica cyclic peptides.

Authors:  Tunjung Mahatmanto; Joshua S Mylne; Aaron G Poth; Joakim E Swedberg; Quentin Kaas; Hanno Schaefer; David J Craik
Journal:  Mol Biol Evol       Date:  2014-11-06       Impact factor: 16.240

4.  Engineering a Catalytically Efficient Recombinant Protein Ligase.

Authors:  Renliang Yang; Yee Hwa Wong; Giang K T Nguyen; James P Tam; Julien Lescar; Bin Wu
Journal:  J Am Chem Soc       Date:  2017-03-01       Impact factor: 15.419

Review 5.  Site-Selective Conjugation of Native Proteins with DNA.

Authors:  Julie B Trads; Thomas Tørring; Kurt V Gothelf
Journal:  Acc Chem Res       Date:  2017-05-09       Impact factor: 22.384

6.  Activation of legumain involves proteolytic and conformational events, resulting in a context- and substrate-dependent activity profile.

Authors:  Elfriede Dall; Hans Brandstetter
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-12-24

7.  Protein Precipitation Using Ammonium Sulfate.

Authors: 
Journal:  Curr Protoc Protein Sci       Date:  2016-04-01

8.  Molecular basis for the production of cyclic peptides by plant asparaginyl endopeptidases.

Authors:  M A Jackson; E K Gilding; T Shafee; K S Harris; Q Kaas; S Poon; K Yap; H Jia; R Guarino; L Y Chan; T Durek; M A Anderson; D J Craik
Journal:  Nat Commun       Date:  2018-06-20       Impact factor: 14.919

9.  Bioorthogonal chemistry: fishing for selectivity in a sea of functionality.

Authors:  Ellen M Sletten; Carolyn R Bertozzi
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

10.  Structural basis of ribosomal peptide macrocyclization in plants.

Authors:  Joel Haywood; Jason W Schmidberger; Amy M James; Samuel G Nonis; Kirill V Sukhoverkov; Mikael Elias; Charles S Bond; Joshua S Mylne
Journal:  Elife       Date:  2018-01-31       Impact factor: 8.140

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