Literature DB >> 19164542

X chromosome inactivation in the absence of Dicer.

Chryssa Kanellopoulou1, Stefan A Muljo, Stoil D Dimitrov, Xi Chen, Christian Colin, Kathrin Plath, David M Livingston.   

Abstract

Dicer is central to the RNA interference (RNAi) pathway, because it is required for processing of double-stranded RNA (dsRNA) precursors into small RNA effector molecules. In principle, any long dsRNA could serve as a substrate for Dicer. The X inactive specific transcript (Xist) is an untranslated RNA that is required for dosage compensation in mammals. It coats and silences 1 of the 2 X chromosomes in female cells and initiates a chromosomewide change in chromatin structure that includes the recruitment of Polycomb proteins, but it is largely unknown how Xist RNA mediates these processes. To investigate a potential link between the RNAi pathway and X inactivation, we generated and analyzed Dicer-deficient embryonic stem (ES) cells. In the absence of Dicer, coating by Xist RNA, initiation of silencing, and recruitment of Polycomb proteins occur normally. Dicer ablation had modest effects on the steady-state levels of spliced Xist RNA. Together our data indicate that the RNAi machinery is not essential for the initiation of X inactivation.

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Year:  2009        PMID: 19164542      PMCID: PMC2633553          DOI: 10.1073/pnas.0812210106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  51 in total

1.  Chromosomal silencing and localization are mediated by different domains of Xist RNA.

Authors:  Anton Wutz; Theodore P Rasmussen; Rudolf Jaenisch
Journal:  Nat Genet       Date:  2002-01-07       Impact factor: 38.330

2.  Establishment of histone h3 methylation on the inactive X chromosome requires transient recruitment of Eed-Enx1 polycomb group complexes.

Authors:  Jose Silva; Winifred Mak; Ilona Zvetkova; Ruth Appanah; Tatyana B Nesterova; Zoe Webster; Antoine H F M Peters; Thomas Jenuwein; Arie P Otte; Neil Brockdorff
Journal:  Dev Cell       Date:  2003-04       Impact factor: 12.270

Review 3.  Post-transcriptional gene silencing by siRNAs and miRNAs.

Authors:  Witold Filipowicz; Lukasz Jaskiewicz; Fabrice A Kolb; Ramesh S Pillai
Journal:  Curr Opin Struct Biol       Date:  2005-06       Impact factor: 6.809

4.  Crucial role of antisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification.

Authors:  Tatsuya Ohhata; Yuko Hoki; Hiroyuki Sasaki; Takashi Sado
Journal:  Development       Date:  2007-12-05       Impact factor: 6.868

Review 5.  microRNA functions.

Authors:  Natascha Bushati; Stephen M Cohen
Journal:  Annu Rev Cell Dev Biol       Date:  2007       Impact factor: 13.827

6.  Characterization of interactions between the mammalian polycomb-group proteins Enx1/EZH2 and EED suggests the existence of different mammalian polycomb-group protein complexes.

Authors:  R G Sewalt; J van der Vlag; M J Gunster; K M Hamer; J L den Blaauwen; D P Satijn; T Hendrix; R van Driel; A P Otte
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

7.  Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution.

Authors:  Nimet Maherali; Rupa Sridharan; Wei Xie; Jochen Utikal; Sarah Eminli; Katrin Arnold; Matthias Stadtfeld; Robin Yachechko; Jason Tchieu; Rudolf Jaenisch; Kathrin Plath; Konrad Hochedlinger
Journal:  Cell Stem Cell       Date:  2007-06-07       Impact factor: 24.633

8.  Tsix, a gene antisense to Xist at the X-inactivation centre.

Authors:  J T Lee; L S Davidow; D Warshawsky
Journal:  Nat Genet       Date:  1999-04       Impact factor: 38.330

9.  RNAi components are required for nuclear clustering of Polycomb group response elements.

Authors:  Charlotte Grimaud; Frédéric Bantignies; Manika Pal-Bhadra; Pallavi Ghana; Utpal Bhadra; Giacomo Cavalli
Journal:  Cell       Date:  2006-03-10       Impact factor: 41.582

10.  Intersection of the RNA interference and X-inactivation pathways.

Authors:  Yuya Ogawa; Bryan K Sun; Jeannie T Lee
Journal:  Science       Date:  2008-06-06       Impact factor: 47.728

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  23 in total

Review 1.  The lesser known story of X chromosome reactivation: a closer look into the reprogramming of the inactive X chromosome.

Authors:  Eriona Hysolli; Yong Wook Jung; Yoshiaki Tanaka; Kun-Yong Kim; In-Hyun Park
Journal:  Cell Cycle       Date:  2012-01-15       Impact factor: 4.534

Review 2.  Gracefully ageing at 50, X-chromosome inactivation becomes a paradigm for RNA and chromatin control.

Authors:  Jeannie T Lee
Journal:  Nat Rev Mol Cell Biol       Date:  2011-11-23       Impact factor: 94.444

Review 3.  The X as model for RNA's niche in epigenomic regulation.

Authors:  Jeannie T Lee
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-03-31       Impact factor: 10.005

4.  Journal club. A geneticist views two theories of X-chromosome inactivation in a broad context.

Authors:  Ahmad M Khalil
Journal:  Nature       Date:  2009-03-19       Impact factor: 49.962

Review 5.  Long noncoding RNAs: functional surprises from the RNA world.

Authors:  Jeremy E Wilusz; Hongjae Sunwoo; David L Spector
Journal:  Genes Dev       Date:  2009-07-01       Impact factor: 11.361

6.  Lessons from X-chromosome inactivation: long ncRNA as guides and tethers to the epigenome.

Authors:  Jeannie T Lee
Journal:  Genes Dev       Date:  2009-08-15       Impact factor: 11.361

7.  Palb2 synergizes with Trp53 to suppress mammary tumor formation in a model of inherited breast cancer.

Authors:  Christian Bowman-Colin; Bing Xia; Samuel Bunting; Christiaan Klijn; Rinske Drost; Peter Bouwman; Laura Fineman; Xixi Chen; Aedin C Culhane; Hong Cai; Scott J Rodig; Roderick T Bronson; Jos Jonkers; Andre Nussenzweig; Chryssa Kanellopoulou; David M Livingston
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-08       Impact factor: 11.205

Review 8.  New and Xisting regulatory mechanisms of X chromosome inactivation.

Authors:  Yesu Jeon; Kavitha Sarma; Jeannie T Lee
Journal:  Curr Opin Genet Dev       Date:  2012-03-16       Impact factor: 5.578

Review 9.  X-chromosome epigenetic reprogramming in pluripotent stem cells via noncoding genes.

Authors:  Daniel H Kim; Yesu Jeon; Montserrat C Anguera; Jeannie T Lee
Journal:  Semin Cell Dev Biol       Date:  2011-03-03       Impact factor: 7.727

10.  Sex chromosome inactivation in the male.

Authors:  Wei Yan; John R McCarrey
Journal:  Epigenetics       Date:  2009-10-25       Impact factor: 4.528

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