Literature DB >> 22424802

New and Xisting regulatory mechanisms of X chromosome inactivation.

Yesu Jeon1, Kavitha Sarma, Jeannie T Lee.   

Abstract

Equalization of X linked gene expression is necessary in mammalian cells due to the presence of two X chromosomes in females and one in males. To achieve this, all female cells inactivate one of the two X chromosomes during development. This process, termed X chromosome inactivation (XCI), is a quintessential epigenetic phenomenon and involves a complex interplay between noncoding RNAs and protein factors. Progress in this area of study has consequently resulted in new approaches to study epigenetics and regulatory RNA function. Here we will discuss recent developments in the field that have advanced our understanding of XCI and its regulatory mechanisms.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22424802      PMCID: PMC3361064          DOI: 10.1016/j.gde.2012.02.007

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  79 in total

1.  Chromosomal silencing and localization are mediated by different domains of Xist RNA.

Authors:  Anton Wutz; Theodore P Rasmussen; Rudolf Jaenisch
Journal:  Nat Genet       Date:  2002-01-07       Impact factor: 38.330

2.  PNA interference mapping demonstrates functional domains in the noncoding RNA Xist.

Authors:  A Beletskii; Y K Hong; J Pehrson; M Egholm; W M Strauss
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

3.  Epigenetic dynamics of imprinted X inactivation during early mouse development.

Authors:  Ikuhiro Okamoto; Arie P Otte; C David Allis; Danny Reinberg; Edith Heard
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

Review 4.  Gracefully ageing at 50, X-chromosome inactivation becomes a paradigm for RNA and chromatin control.

Authors:  Jeannie T Lee
Journal:  Nat Rev Mol Cell Biol       Date:  2011-11-23       Impact factor: 94.444

5.  Crucial role of antisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification.

Authors:  Tatsuya Ohhata; Yuko Hoki; Hiroyuki Sasaki; Takashi Sado
Journal:  Development       Date:  2007-12-05       Impact factor: 6.868

6.  Sensing X chromosome pairs before X inactivation via a novel X-pairing region of the Xic.

Authors:  S Augui; G J Filion; S Huart; E Nora; M Guggiari; M Maresca; A F Stewart; E Heard
Journal:  Science       Date:  2007-12-07       Impact factor: 47.728

7.  Molecular coupling of Xist regulation and pluripotency.

Authors:  Pablo Navarro; Ian Chambers; Violetta Karwacki-Neisius; Corinne Chureau; Céline Morey; Claire Rougeulle; Philip Avner
Journal:  Science       Date:  2008-09-19       Impact factor: 47.728

8.  The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation.

Authors:  Di Tian; Sha Sun; Jeannie T Lee
Journal:  Cell       Date:  2010-10-29       Impact factor: 41.582

9.  Human Orc2 localizes to centrosomes, centromeres and heterochromatin during chromosome inheritance.

Authors:  Supriya G Prasanth; Kannanganattu V Prasanth; Khalid Siddiqui; David L Spector; Bruce Stillman
Journal:  EMBO J       Date:  2004-06-24       Impact factor: 11.598

10.  X-chromosome hyperactivation in mammals via nonlinear relationships between chromatin states and transcription.

Authors:  Eda Yildirim; Ruslan I Sadreyev; Stefan F Pinter; Jeannie T Lee
Journal:  Nat Struct Mol Biol       Date:  2011-12-04       Impact factor: 15.369

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  47 in total

Review 1.  Random and non-random monoallelic expression.

Authors:  Andrew Chess
Journal:  Neuropsychopharmacology       Date:  2012-07-04       Impact factor: 7.853

Review 2.  Regulation of mammary epithelial cell homeostasis by lncRNAs.

Authors:  Amy N Shore; Jeffrey M Rosen
Journal:  Int J Biochem Cell Biol       Date:  2014-03-26       Impact factor: 5.085

Review 3.  The evolution of X chromosome inactivation in mammals: the demise of Ohno's hypothesis?

Authors:  Eugénie Pessia; Jan Engelstädter; Gabriel A B Marais
Journal:  Cell Mol Life Sci       Date:  2013-10-31       Impact factor: 9.261

4.  Long non-coding RNA H19 enhances cell proliferation and anchorage-independent growth of cervical cancer cell lines.

Authors:  Tawin Iempridee
Journal:  Exp Biol Med (Maywood)       Date:  2016-10-04

5.  Antisense long noncoding RNAs regulate var gene activation in the malaria parasite Plasmodium falciparum.

Authors:  Inbar Amit-Avraham; Guy Pozner; Shiri Eshar; Yair Fastman; Netanel Kolevzon; Eylon Yavin; Ron Dzikowski
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

6.  DNA methylation and functional characterization of the XIST gene during in vitro early embryo development in cattle.

Authors:  Anelise Dos Santos Mendonça; Márcia Marques Silveira; Álvaro Fabrício Lopes Rios; Paula Magnelli Mangiavacchi; Alexandre Rodrigues Caetano; Margot Alves Nunes Dode; Maurício Machaim Franco
Journal:  Epigenetics       Date:  2019-04-12       Impact factor: 4.528

Review 7.  Insight into lncRNA biology using hybridization capture analyses.

Authors:  Matthew D Simon
Journal:  Biochim Biophys Acta       Date:  2015-09-14

8.  Structural insights reveal the specific recognition of roX RNA by the dsRNA-binding domains of the RNA helicase MLE and its indispensable role in dosage compensation in Drosophila.

Authors:  Mengqi Lv; Yixiang Yao; Fudong Li; Ling Xu; Lingna Yang; Qingguo Gong; Yong-Zhen Xu; Yunyu Shi; Yu-Jie Fan; Yajun Tang
Journal:  Nucleic Acids Res       Date:  2019-04-08       Impact factor: 16.971

9.  Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre.

Authors:  Ezgi Hacisuleyman; Loyal A Goff; Cole Trapnell; Adam Williams; Jorge Henao-Mejia; Lei Sun; Patrick McClanahan; David G Hendrickson; Martin Sauvageau; David R Kelley; Michael Morse; Jesse Engreitz; Eric S Lander; Mitch Guttman; Harvey F Lodish; Richard Flavell; Arjun Raj; John L Rinn
Journal:  Nat Struct Mol Biol       Date:  2014-01-26       Impact factor: 15.369

10.  Mitotically-Associated lncRNA (MANCR) Affects Genomic Stability and Cell Division in Aggressive Breast Cancer.

Authors:  Kirsten M Tracy; Coralee E Tye; Prachi N Ghule; Heidi L H Malaby; Jason Stumpff; Janet L Stein; Gary S Stein; Jane B Lian
Journal:  Mol Cancer Res       Date:  2018-01-29       Impact factor: 5.852

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