Literature DB >> 19156357

Thermus thermophilus as biological model.

Felipe Cava1, Aurelio Hidalgo, José Berenguer.   

Abstract

Thermus spp is one of the most wide spread genuses of thermophilic bacteria, with isolates found in natural as well as in man-made thermal environments. The high growth rates, cell yields of the cultures, and the constitutive expression of an impressively efficient natural competence apparatus, amongst other properties, make some strains of the genus excellent laboratory models to study the molecular basis of thermophilia. These properties, together with the fact that enzymes and protein complexes from extremophiles are easier to crystallize have led to the development of an ongoing structural biology program dedicated to T. thermophilus HB8, making this organism probably the best so far known from a protein structure point view. Furthermore, the availability of plasmids and up to four thermostable antibiotic selection markers allows its use in physiological studies as a model for ancient bacteria. Regarding biotechnological applications this genus continues to be a source of thermophilic enzymes of great biotechnological interest and, more recently, a tool for the over-expression of thermophilic enzymes or for the selection of thermostable mutants from mesophilic proteins by directed evolution. In this article, we review the properties of this organism as biological model and its biotechnological applications.

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Year:  2009        PMID: 19156357     DOI: 10.1007/s00792-009-0226-6

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  163 in total

1.  Specific cleavage of DNA molecules at RecA-mediated triple-strand structure.

Authors:  Yasushi Shigemori; Michio Oishi
Journal:  Nucleic Acids Res       Date:  2004-01-02       Impact factor: 16.971

2.  Minimizing deletion mutagenesis artifact during Taq DNA polymerase PCR by E. coli SSB.

Authors:  Q Chou
Journal:  Nucleic Acids Res       Date:  1992-08-25       Impact factor: 16.971

3.  Multiple-mutation reaction: a method for simultaneous introduction of multiple mutations into the glpK gene of Mycoplasma pneumoniae.

Authors:  Claudine Hames; Sven Halbedel; Oliver Schilling; Jörg Stülke
Journal:  Appl Environ Microbiol       Date:  2005-07       Impact factor: 4.792

4.  Isolation of prokaryotic V0V1-ATPase from a thermophilic eubacterium Thermus thermophilus.

Authors:  K Yokoyama; Y Akabane; N Ishii; M Yoshida
Journal:  J Biol Chem       Date:  1994-04-22       Impact factor: 5.157

5.  Temporal regulation of viral transcription during development of Thermus thermophilus bacteriophage phiYS40.

Authors:  Anastasiya Sevostyanova; Marko Djordjevic; Konstantin Kuznedelov; Tatyana Naryshkina; Mikhail S Gelfand; Konstantin Severinov; Leonid Minakhin
Journal:  J Mol Biol       Date:  2006-11-18       Impact factor: 5.469

6.  Identification of the outer membrane porin of Thermus thermophilus HB8: the channel-forming complex has an unusually high molecular mass and an extremely large single-channel conductance.

Authors:  E Maier; G Polleichtner; B Boeck; R Schinzel; R Benz
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

7.  Cloning, overexpression, and purification of the recombinant His-tagged SSB protein of Escherichia coli and use in polymerase chain reaction amplification.

Authors:  S Dabrowski; J Kur
Journal:  Protein Expr Purif       Date:  1999-06       Impact factor: 1.650

8.  Isolation of a thermostable enzyme variant by cloning and selection in a thermophile.

Authors:  H Liao; T McKenzie; R Hageman
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

Review 9.  The pyruvate dehydrogenase complex from thermophilic organisms: thermal stability and re-association from the enzyme components.

Authors:  S Witzmann; H Bisswanger
Journal:  Biochim Biophys Acta       Date:  1998-06-29

10.  Top DNA polymerase from Thermus thermophilus HB27: gene cloning, sequence determination, and physicochemical properties.

Authors:  J S Kim; S Koh; J J Kim; S T Kwon; D S Lee
Journal:  Mol Cells       Date:  1998-04-30       Impact factor: 5.034

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  73 in total

Review 1.  Diversity in transcripts and translational pattern of stress proteins in marine extremophiles.

Authors:  I V Ambily Nath; P A Loka Bharathi
Journal:  Extremophiles       Date:  2011-01-06       Impact factor: 2.395

2.  An extreme thermophile, Thermus thermophilus, is a polyploid bacterium.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

3.  A novel thermostable protein-tag: optimization of the Sulfolobus solfataricus DNA- alkyl-transferase by protein engineering.

Authors:  Antonella Vettone; Mario Serpe; Aurelio Hidalgo; José Berenguer; Giovanni del Monaco; Anna Valenti; Mosé Rossi; Maria Ciaramella; Giuseppe Perugino
Journal:  Extremophiles       Date:  2016-01       Impact factor: 2.395

4.  Curing the Megaplasmid pTT27 from Thermus thermophilus HB27 and Maintaining Exogenous Plasmids in the Plasmid-Free Strain.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  Appl Environ Microbiol       Date:  2015-12-28       Impact factor: 4.792

5.  Co-utilization of glucose and xylose by evolved Thermus thermophilus LC113 strain elucidated by (13)C metabolic flux analysis and whole genome sequencing.

Authors:  Lauren T Cordova; Jing Lu; Robert M Cipolla; Nicholas R Sandoval; Christopher P Long; Maciek R Antoniewicz
Journal:  Metab Eng       Date:  2016-05-07       Impact factor: 9.783

6.  Isolation and characterization of a new bacteriophage MMP17 from Meiothermus.

Authors:  Lianbing Lin; Jian Han; Xiuling Ji; Wei Hong; Li Huang; Yunlin Wei
Journal:  Extremophiles       Date:  2011-01-12       Impact factor: 2.395

7.  Quality control by trans-editing factor prevents global mistranslation of non-protein amino acid α-aminobutyrate.

Authors:  Jo Marie Bacusmo; Alexandra B Kuzmishin; William A Cantara; Yuki Goto; Hiroaki Suga; Karin Musier-Forsyth
Journal:  RNA Biol       Date:  2017-11-03       Impact factor: 4.652

8.  Novel stand-alone RAM domain protein-mediated catalytic control of anthranilate phosphoribosyltransferase in tryptophan biosynthesis in Thermus thermophilus.

Authors:  Tetsuo Kubota; Hajime Matsushita; Takeo Tomita; Saori Kosono; Minoru Yoshida; Tomohisa Kuzuyama; Makoto Nishiyama
Journal:  Extremophiles       Date:  2016-10-19       Impact factor: 2.395

9.  Lysine propionylation is a prevalent post-translational modification in Thermus thermophilus.

Authors:  Hiroki Okanishi; Kwang Kim; Ryoji Masui; Seiki Kuramitsu
Journal:  Mol Cell Proteomics       Date:  2014-06-17       Impact factor: 5.911

10.  Markerless Gene Deletion with Cytosine Deaminase in Thermus thermophilus Strain HB27.

Authors:  Lei Wang; Jana Hoffmann; Hildegard Watzlawick; Josef Altenbuchner
Journal:  Appl Environ Microbiol       Date:  2015-12-11       Impact factor: 4.792

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