Literature DB >> 20729360

An extreme thermophile, Thermus thermophilus, is a polyploid bacterium.

Naoto Ohtani1, Masaru Tomita, Mitsuhiro Itaya.   

Abstract

An extremely thermophilic bacterium, Thermus thermophilus HB8, is one of the model organisms for systems biology. Its genome consists of a chromosome (1.85 Mb), a megaplasmid (0.26 Mb) designated pTT27, and a plasmid (9.3 kb) designated pTT8, and the complete sequence is available. We show here that T. thermophilus is a polyploid organism, harboring multiple genomic copies in a cell. In the case of the HB8 strain, the copy number of the chromosome was estimated to be four or five, and the copy number of the pTT27 megaplasmid seemed to be equal to that of the chromosome. It has never been discussed whether T. thermophilus is haploid or polyploid. However, the finding that it is polyploid is not surprising, as Deinococcus radiodurans, an extremely radioresistant bacterium closely related to Thermus, is well known to be a polyploid organism. As is the case for D. radiodurans in the radiation environment, the polyploidy of T. thermophilus might allow for genomic DNA protection, maintenance, and repair at elevated growth temperatures. Polyploidy often complicates the recognition of an essential gene in T. thermophilus as a model organism for systems biology.

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Year:  2010        PMID: 20729360      PMCID: PMC2950507          DOI: 10.1128/JB.00662-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  42 in total

1.  Temperature-dependent hypermutational phenotype in recA mutants of Thermus thermophilus HB27.

Authors:  Pablo Castán; Lorena Casares; Jordi Barbé; José Berenguer
Journal:  J Bacteriol       Date:  2003-08       Impact factor: 3.490

Review 2.  Structure and segregation of the bacterial nucleoid.

Authors:  Ling Juan Wu
Journal:  Curr Opin Genet Dev       Date:  2004-04       Impact factor: 5.578

3.  Relationship between DNA cycle and growth rate in Synechococcus sp. strain PCC 6301.

Authors:  B J Binder; S W Chisholm
Journal:  J Bacteriol       Date:  1990-05       Impact factor: 3.490

4.  Multiple chromosomes of Azotobacter vinelandii.

Authors:  P Nagpal; S Jafri; M A Reddy; H K Das
Journal:  J Bacteriol       Date:  1989-06       Impact factor: 3.490

5.  Bottom-up genome assembly using the Bacillus subtilis genome vector.

Authors:  Mitsuhiro Itaya; Kyoko Fujita; Azusa Kuroki; Kenji Tsuge
Journal:  Nat Methods       Date:  2007-12-09       Impact factor: 28.547

6.  The entire population of Thermus thermophilus cells is always competent at any growth phase.

Authors:  Y Hidaka; M Hasegawa; T Nakahara; T Hoshino
Journal:  Biosci Biotechnol Biochem       Date:  1994-07       Impact factor: 2.043

7.  The genome sequence of the extreme thermophile Thermus thermophilus.

Authors:  Anke Henne; Holger Brüggemann; Carsten Raasch; Arnim Wiezer; Thomas Hartsch; Heiko Liesegang; Andre Johann; Tanja Lienard; Olivia Gohl; Rosa Martinez-Arias; Carsten Jacobi; Vytaute Starkuviene; Silke Schlenczeck; Silke Dencker; Robert Huber; Hans-Peter Klenk; Wilfried Kramer; Rainer Merkl; Gerhard Gottschalk; Hans-Joachim Fritz
Journal:  Nat Biotechnol       Date:  2004-04-04       Impact factor: 54.908

8.  Genetic transformation of the extreme thermophile Thermus thermophilus and of other Thermus spp.

Authors:  Y Koyama; T Hoshino; N Tomizuka; K Furukawa
Journal:  J Bacteriol       Date:  1986-04       Impact factor: 3.490

9.  Junction ribonuclease: a ribonuclease HII orthologue from Thermus thermophilus HB8 prefers the RNA-DNA junction to the RNA/DNA heteroduplex.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  Biochem J       Date:  2008-06-15       Impact factor: 3.857

10.  Recombination and replication in DNA repair of heavily irradiated Deinococcus radiodurans.

Authors:  Dea Slade; Ariel B Lindner; Gregory Paul; Miroslav Radman
Journal:  Cell       Date:  2009-03-20       Impact factor: 41.582

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  48 in total

1.  Curing the Megaplasmid pTT27 from Thermus thermophilus HB27 and Maintaining Exogenous Plasmids in the Plasmid-Free Strain.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  Appl Environ Microbiol       Date:  2015-12-28       Impact factor: 4.792

2.  A Key Enzyme of the NAD+ Salvage Pathway in Thermus thermophilus: Characterization of Nicotinamidase and the Impact of Its Gene Deletion at High Temperatures.

Authors:  Hironori Taniguchi; Sathidaphorn Sungwallek; Phatcharin Chotchuang; Kenji Okano; Kohsuke Honda
Journal:  J Bacteriol       Date:  2017-08-08       Impact factor: 3.490

Review 3.  Maintenance of multipartite genome system and its functional significance in bacteria.

Authors:  Hari Sharan Misra; Ganesh Kumar Maurya; Swathi Kota; Vijaya Kumar Charaka
Journal:  J Genet       Date:  2018-09       Impact factor: 1.166

4.  Identification of a replication initiation protein of the pVV8 plasmid from Thermus thermophilus HB8.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  Extremophiles       Date:  2012-11-01       Impact factor: 2.395

5.  Roles of Mn-catalase and a possible heme peroxidase homologue in protection from oxidative stress in Thermus thermophilus.

Authors:  Akio Ebihara; Miho Manzoku; Kenji Fukui; Atsuhiro Shimada; Rihito Morita; Ryoji Masui; Seiki Kuramitsu
Journal:  Extremophiles       Date:  2015-05-22       Impact factor: 2.395

6.  Selection-free markerless genome manipulations in the polyploid bacterium Thermus thermophilus.

Authors:  Haijuan Li
Journal:  3 Biotech       Date:  2019-03-23       Impact factor: 2.406

7.  The third plasmid pVV8 from Thermus thermophilus HB8: isolation, characterization, and sequence determination.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  Extremophiles       Date:  2012-01-03       Impact factor: 2.395

8.  Cre/lox-based multiple markerless gene disruption in the genome of the extreme thermophile Thermus thermophilus.

Authors:  Yoichiro Togawa; Tatsuo Nunoshiba; Keiichiro Hiratsu
Journal:  Mol Genet Genomics       Date:  2017-08-24       Impact factor: 3.291

9.  DNA Processing Proteins Involved in the UV-Induced Stress Response of Sulfolobales.

Authors:  Marleen van Wolferen; Xiaoqing Ma; Sonja-Verena Albers
Journal:  J Bacteriol       Date:  2015-07-06       Impact factor: 3.490

10.  Essentiality of threonylcarbamoyladenosine (t(6)A), a universal tRNA modification, in bacteria.

Authors:  Patrick C Thiaville; Basma El Yacoubi; Caroline Köhrer; Jennifer J Thiaville; Chris Deutsch; Dirk Iwata-Reuyl; Jo Marie Bacusmo; Jean Armengaud; Yoshitaka Bessho; Collin Wetzel; Xiaoyu Cao; Patrick A Limbach; Uttam L RajBhandary; Valérie de Crécy-Lagard
Journal:  Mol Microbiol       Date:  2015-10-07       Impact factor: 3.501

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