Literature DB >> 26499124

A novel thermostable protein-tag: optimization of the Sulfolobus solfataricus DNA- alkyl-transferase by protein engineering.

Antonella Vettone1, Mario Serpe, Aurelio Hidalgo, José Berenguer, Giovanni del Monaco, Anna Valenti, Mosé Rossi, Maria Ciaramella, Giuseppe Perugino.   

Abstract

In the last decade, a powerful biotechnological tool for the in vivo and in vitro specific labeling of proteins (SNAP-tag™ technology) was proposed as a valid alternative to classical protein-tags (green fluorescent proteins, GFPs). This was made possible by the discovery of the irreversible reaction of the human alkylguanine-DNA-alkyl-transferase (hAGT) in the presence of benzyl-guanine derivatives. However, the mild reaction conditions and the general instability of the mesophilic SNAP-tag™ make this new approach not fully applicable to (hyper-)thermophilic and, in general, extremophilic organisms. Here, we introduce an engineered variant of the thermostable alkylguanine-DNA-alkyl-transferase from the Archaea Sulfolobus solfataricus (SsOGT-H5), which displays a catalytic efficiency comparable to the SNAP-tag™ protein, but showing high intrinsic stability typical of proteins from this organism. The successful heterologous expression obtained in a thermophilic model organism makes SsOGT-H5 a valid candidate as protein-tag for organisms living in extreme environments.

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Year:  2016        PMID: 26499124     DOI: 10.1007/s00792-015-0791-9

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  33 in total

1.  Labeling of fusion proteins with synthetic fluorophores in live cells.

Authors:  Antje Keppler; Horst Pick; Claudio Arrivoli; Horst Vogel; Kai Johnsson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-28       Impact factor: 11.205

2.  Function of domains of human O6-alkylguanine-DNA alkyltransferase.

Authors:  Qingming Fang; Sreenivas Kanugula; Anthony E Pegg
Journal:  Biochemistry       Date:  2005-11-22       Impact factor: 3.162

3.  Effect of alterations of key active site residues in O6-alkylguanine-DNA Alkyltransferase on its ability to modulate the genotoxicity of 1,2-dibromoethane.

Authors:  Liping Liu; Kengo Watanabe; Qingming Fang; Kevin M Williams; F Peter Guengerich; Anthony E Pegg
Journal:  Chem Res Toxicol       Date:  2007-01       Impact factor: 3.739

4.  An engineered protein tag for multiprotein labeling in living cells.

Authors:  Arnaud Gautier; Alexandre Juillerat; Christian Heinis; Ivan Reis Corrêa; Maik Kindermann; Florent Beaufils; Kai Johnsson
Journal:  Chem Biol       Date:  2008-02

5.  Restoration of the activity of active-site mutants of the hyperthermophilic beta-glycosidase from Sulfolobus solfataricus: dependence of the mechanism on the action of external nucleophiles.

Authors:  M Moracci; A Trincone; G Perugino; M Ciaramella; M Rossi
Journal:  Biochemistry       Date:  1998-12-08       Impact factor: 3.162

6.  Engineering color variants of green fluorescent protein (GFP) for thermostability, pH-sensitivity, and improved folding kinetics.

Authors:  Naser Aliye; Attilio Fabbretti; Giulio Lupidi; Tsepo Tsekoa; Roberto Spurio
Journal:  Appl Microbiol Biotechnol       Date:  2014-08-13       Impact factor: 4.813

7.  Green fluorescent protein as a marker for gene expression.

Authors:  M Chalfie; Y Tu; G Euskirchen; W W Ward; D C Prasher
Journal:  Science       Date:  1994-02-11       Impact factor: 47.728

8.  DNA binding and nucleotide flipping by the human DNA repair protein AGT.

Authors:  Douglas S Daniels; Tammy T Woo; Kieu X Luu; David M Noll; Neil D Clarke; Anthony E Pegg; John A Tainer
Journal:  Nat Struct Mol Biol       Date:  2004-06-27       Impact factor: 15.369

9.  Biochemical and structural studies of the Mycobacterium tuberculosis O6-methylguanine methyltransferase and mutated variants.

Authors:  Riccardo Miggiano; Valentina Casazza; Silvia Garavaglia; Maria Ciaramella; Giuseppe Perugino; Menico Rizzi; Franca Rossi
Journal:  J Bacteriol       Date:  2013-04-05       Impact factor: 3.490

10.  DNA-guided DNA interference by a prokaryotic Argonaute.

Authors:  Daan C Swarts; Matthijs M Jore; Edze R Westra; Yifan Zhu; Jorijn H Janssen; Ambrosius P Snijders; Yanli Wang; Dinshaw J Patel; José Berenguer; Stan J J Brouns; John van der Oost
Journal:  Nature       Date:  2014-02-16       Impact factor: 49.962

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  8 in total

1.  Folding-upon-Repair DNA Nanoswitches for Monitoring the Activity of DNA Repair Enzymes.

Authors:  Nada Farag; Rosanna Mattossovich; Rosa Merlo; Łukasz Nierzwicki; Giulia Palermo; Alessandro Porchetta; Giuseppe Perugino; Francesco Ricci
Journal:  Angew Chem Int Ed Engl       Date:  2021-02-17       Impact factor: 15.336

2.  A journey down to hell: new thermostable protein-tags for biotechnology at high temperatures.

Authors:  Rosanna Mattossovich; Rosa Merlo; Angelo Fontana; Giuliana d'Ippolito; Michael P Terns; Elizabeth A Watts; Anna Valenti; Giuseppe Perugino
Journal:  Extremophiles       Date:  2019-09-25       Impact factor: 3.035

Review 3.  Every OGT Is Illuminated … by Fluorescent and Synchrotron Lights.

Authors:  Riccardo Miggiano; Anna Valenti; Franca Rossi; Menico Rizzi; Giuseppe Perugino; Maria Ciaramella
Journal:  Int J Mol Sci       Date:  2017-12-05       Impact factor: 5.923

Review 4.  O6-alkylguanine-DNA Alkyltransferases in Microbes Living on the Edge: From Stability to Applicability.

Authors:  Rosanna Mattossovich; Rosa Merlo; Riccardo Miggiano; Anna Valenti; Giuseppe Perugino
Journal:  Int J Mol Sci       Date:  2020-04-20       Impact factor: 5.923

5.  An AGT-based protein-tag system for the labelling and surface immobilization of enzymes on E. coli outer membrane.

Authors:  Rosa Merlo; Sonia Del Prete; Anna Valenti; Rosanna Mattossovich; Vincenzo Carginale; Claudiu T Supuran; Clemente Capasso; Giuseppe Perugino
Journal:  J Enzyme Inhib Med Chem       Date:  2019-12       Impact factor: 5.051

6.  First thermostable CLIP-tag by rational design applied to an archaeal O6 -alkyl-guanine-DNA-alkyl-transferase.

Authors:  Rosa Merlo; Rosanna Mattossovich; Marianna Genta; Anna Valenti; Giovanni Di Mauro; Alberto Minassi; Riccardo Miggiano; Giuseppe Perugino
Journal:  Comput Struct Biotechnol J       Date:  2022-09-18       Impact factor: 6.155

7.  In vivo and in vitro protein imaging in thermophilic archaea by exploiting a novel protein tag.

Authors:  Valeria Visone; Wenyuan Han; Giuseppe Perugino; Giovanni Del Monaco; Qunxin She; Mosè Rossi; Anna Valenti; Maria Ciaramella
Journal:  PLoS One       Date:  2017-10-03       Impact factor: 3.240

8.  The SNAP-tag technology revised: an effective chemo-enzymatic approach by using a universal azide-based substrate.

Authors:  Rosa Merlo; Diego Caprioglio; Michele Cillo; Anna Valenti; Rosanna Mattossovich; Castrese Morrone; Alberto Massarotti; Franca Rossi; Riccardo Miggiano; Antonio Leonardi; Alberto Minassi; Giuseppe Perugino
Journal:  J Enzyme Inhib Med Chem       Date:  2021-12       Impact factor: 5.051

  8 in total

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