Literature DB >> 19152791

Suite of finite element algorithms for accurate computation of soft tissue deformation for surgical simulation.

Grand Roman Joldes1, Adam Wittek, Karol Miller.   

Abstract

Real time computation of soft tissue deformation is important for the use of augmented reality devices and for providing haptic feedback during operation or surgeon training. This requires algorithms that are fast, accurate and can handle material nonlinearities and large deformations. A set of such algorithms is presented in this paper, starting with the finite element formulation and the integration scheme used and addressing common problems such as hourglass control and locking. The computation examples presented prove that by using these algorithms, real time computations become possible without sacrificing the accuracy of the results. For a brain model having more than 7,000 degrees of freedom, we computed the reaction forces due to indentation with frequency of around 1,000 Hz using a standard dual core PC. Similarly, we conducted simulation of brain shift using a model with more than 50,000 degrees of freedom in less than one minute. The speed benefits of our models result from combining the Total Lagrangian formulation with explicit time integration and low order finite elements.

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Year:  2008        PMID: 19152791      PMCID: PMC2783832          DOI: 10.1016/j.media.2008.12.001

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  15 in total

1.  Mechanical properties of brain tissue in-vivo: experiment and computer simulation.

Authors:  K Miller; K Chinzei; G Orssengo; P Bednarz
Journal:  J Biomech       Date:  2000-11       Impact factor: 2.712

2.  Model-driven brain shift compensation.

Authors:  Oskar Skrinjar; Arya Nabavi; James Duncan
Journal:  Med Image Anal       Date:  2002-12       Impact factor: 8.545

3.  Orbital and maxillofacial computer aided surgery: patient-specific finite element models to predict surgical outcomes.

Authors:  Vincent Luboz; Matthieu Chabanas; Pascal Swider; Yohan Payan
Journal:  Comput Methods Biomech Biomed Engin       Date:  2005-08       Impact factor: 1.763

4.  Interactive simulation of needle insertion models.

Authors:  Simon P DiMaio; Septimiu E Salcudean
Journal:  IEEE Trans Biomed Eng       Date:  2005-07       Impact factor: 4.538

5.  Brain shift computation using a fully nonlinear biomechanical model.

Authors:  Adam Wittek; Ron Kikinis; Simon K Warfield; Karol Miller
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

6.  Intraoperative brain shift prediction using a 3D inhomogeneous patient-specific finite element model.

Authors:  Jingwen Hu; Xin Jin; Jong B Lee; Liying Zhang; Vipin Chaudhary; Murali Guthikonda; King H Yang; Albert I King
Journal:  J Neurosurg       Date:  2007-01       Impact factor: 5.115

7.  On the unimportance of constitutive models in computing brain deformation for image-guided surgery.

Authors:  Adam Wittek; Trent Hawkins; Karol Miller
Journal:  Biomech Model Mechanobiol       Date:  2008-02-02

8.  The mesh-matching algorithm: an automatic 3D mesh generator for finite element structures.

Authors:  B Couteau; Y Payan; S Lavallée
Journal:  J Biomech       Date:  2000-08       Impact factor: 2.712

9.  Constitutive modelling of brain tissue: experiment and theory.

Authors:  K Miller; K Chinzei
Journal:  J Biomech       Date:  1997 Nov-Dec       Impact factor: 2.712

10.  Non-locking Tetrahedral Finite Element for Surgical Simulation.

Authors:  Grand Roman Joldes; Adam Wittek; Karol Miller
Journal:  Commun Numer Methods Eng       Date:  2009-07
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  19 in total

1.  Real-Time Nonlinear Finite Element Computations on GPU - Application to Neurosurgical Simulation.

Authors:  Grand Roman Joldes; Adam Wittek; Karol Miller
Journal:  Comput Methods Appl Mech Eng       Date:  2010-12-15       Impact factor: 6.756

2.  Development of in vivo constitutive models for liver: application to surgical simulation.

Authors:  Kevin Lister; Zhan Gao; Jaydev P Desai
Journal:  Ann Biomed Eng       Date:  2010-12-16       Impact factor: 3.934

3.  Patient-specific non-linear finite element modelling for predicting soft organ deformation in real-time: application to non-rigid neuroimage registration.

Authors:  Adam Wittek; Grand Joldes; Mathieu Couton; Simon K Warfield; Karol Miller
Journal:  Prog Biophys Mol Biol       Date:  2010-09-22       Impact factor: 3.667

4.  Patient-specific biomechanical model as whole-body CT image registration tool.

Authors:  Mao Li; Karol Miller; Grand Roman Joldes; Barry Doyle; Revanth Reddy Garlapati; Ron Kikinis; Adam Wittek
Journal:  Med Image Anal       Date:  2015-01-30       Impact factor: 8.545

5.  Suite of meshless algorithms for accurate computation of soft tissue deformation for surgical simulation.

Authors:  Grand Joldes; George Bourantas; Benjamin Zwick; Habib Chowdhury; Adam Wittek; Sudip Agrawal; Konstantinos Mountris; Damon Hyde; Simon K Warfield; Karol Miller
Journal:  Med Image Anal       Date:  2019-06-12       Impact factor: 8.545

6.  Deformation of facial model for complete denture prosthesis using ARAP group method and elastic properties.

Authors:  Cheng Cheng; Xiaosheng Cheng; Ning Dai; Yuchun Sun; Xiaotong Jiang; Weiwei Li
Journal:  Med Biol Eng Comput       Date:  2017-02-07       Impact factor: 2.602

7.  Efficient inverse isoparametric mapping algorithm for whole-body computed tomography registration using deformations predicted by nonlinear finite element modeling.

Authors:  Mao Li; Adam Wittek; Karol Miller
Journal:  J Biomech Eng       Date:  2014-08       Impact factor: 2.097

8.  On the prospect of patient-specific biomechanics without patient-specific properties of tissues.

Authors:  Karol Miller; Jia Lu
Journal:  J Mech Behav Biomed Mater       Date:  2013-02-09

9.  More accurate neuronavigation data provided by biomechanical modeling instead of rigid registration.

Authors:  Revanth Reddy Garlapati; Aditi Roy; Grand Roman Joldes; Adam Wittek; Ahmed Mostayed; Barry Doyle; Simon Keith Warfield; Ron Kikinis; Neville Knuckey; Stuart Bunt; Karol Miller
Journal:  J Neurosurg       Date:  2014-01-24       Impact factor: 5.115

10.  Biomechanical model as a registration tool for image-guided neurosurgery: evaluation against BSpline registration.

Authors:  Ahmed Mostayed; Revanth Reddy Garlapati; Grand Roman Joldes; Adam Wittek; Aditi Roy; Ron Kikinis; Simon K Warfield; Karol Miller
Journal:  Ann Biomed Eng       Date:  2013-06-15       Impact factor: 3.934

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