Literature DB >> 19147747

Clinical applications of metabolomics in oncology: a review.

Jennifer L Spratlin1, Natalie J Serkova, S Gail Eckhardt.   

Abstract

Metabolomics, an omic science in systems biology, is the global quantitative assessment of endogenous metabolites within a biological system. Either individually or grouped as a metabolomic profile, detection of metabolites is carried out in cells, tissues, or biofluids by either nuclear magnetic resonance spectroscopy or mass spectrometry. There is potential for the metabolome to have a multitude of uses in oncology, including the early detection and diagnosis of cancer and as both a predictive and pharmacodynamic marker of drug effect. Despite this, there is lack of knowledge in the oncology community regarding metabolomics and confusion about its methodologic processes, technical challenges, and clinical applications. Metabolomics, when used as a translational research tool, can provide a link between the laboratory and clinic, particularly because metabolic and molecular imaging technologies, such as positron emission tomography and magnetic resonance spectroscopic imaging, enable the discrimination of metabolic markers noninvasively in vivo. Here, we review the current and potential applications of metabolomics, focusing on its use as a biomarker for cancer diagnosis, prognosis, and therapeutic evaluation.

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Year:  2009        PMID: 19147747      PMCID: PMC2676437          DOI: 10.1158/1078-0432.CCR-08-1059

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  89 in total

1.  Prediction of response to neoadjuvant chemotherapy by sequential F-18-fluorodeoxyglucose positron emission tomography in patients with advanced-stage ovarian cancer.

Authors:  Norbert Avril; Stefanie Sassen; Barbara Schmalfeldt; Joerg Naehrig; Stephan Rutke; Wolfgang A Weber; Martin Werner; Henner Graeff; Markus Schwaiger; Walther Kuhn
Journal:  J Clin Oncol       Date:  2005-09-12       Impact factor: 44.544

2.  Characterization of the biochemical effects of 1-nitronaphthalene in rats using global metabolic profiling by NMR spectroscopy and pattern recognition.

Authors:  J Azmi; J Connelly; E Holmes; J K Nicholson; R F Shore; J L Griffin
Journal:  Biomarkers       Date:  2005 Nov-Dec       Impact factor: 2.658

3.  [1,2-13C2]-D-glucose profiles of the serum, liver, pancreas, and DMBA-induced pancreatic tumors of rats.

Authors:  László G Boros; Megan R Lerner; Daniel L Morgan; Stephanie L Taylor; Brenda J Smith; Russell G Postier; Daniel J Brackett
Journal:  Pancreas       Date:  2005-11       Impact factor: 3.327

4.  Metabolic signatures associated with a NAD synthesis inhibitor-induced tumor apoptosis identified by 1H-decoupled-31P magnetic resonance spectroscopy.

Authors:  Manickam Muruganandham; Alan A Alfieri; Cornelia Matei; Yuchun Chen; George Sukenick; Isabel Schemainda; Max Hasmann; Leonard B Saltz; Jason A Koutcher
Journal:  Clin Cancer Res       Date:  2005-05-01       Impact factor: 12.531

Review 5.  Detection of resistance to imatinib by metabolic profiling: clinical and drug development implications.

Authors:  Natalie Serkova; László G Boros
Journal:  Am J Pharmacogenomics       Date:  2005

6.  Preliminary assessment of magnetic resonance spectroscopic imaging in predicting treatment outcome in patients with prostate cancer at high risk for relapse.

Authors:  Darko Pucar; Jason A Koutcher; Ankoor Shah; John P Dyke; Lawrence Schwartz; Howard Thaler; John Kurhanewicz; Peter T Scardino; W Kevin Kelly; Hedvig Hricak; Kristen L Zakian
Journal:  Clin Prostate Cancer       Date:  2004-12

7.  Detection of epithelial ovarian cancer using 1H-NMR-based metabonomics.

Authors:  Kunle Odunsi; Robert M Wollman; Christine B Ambrosone; Alan Hutson; Susan E McCann; Jonathan Tammela; John P Geisler; Gregory Miller; Thomas Sellers; William Cliby; Feng Qian; Bernadette Keitz; Marilyn Intengan; Shashikant Lele; James L Alderfer
Journal:  Int J Cancer       Date:  2005-02-20       Impact factor: 7.396

8.  Expanding the use of magnetic resonance in the assessment of tumor response to therapy: workshop report.

Authors:  Jeffrey Evelhoch; Michael Garwood; Daniel Vigneron; Michael Knopp; Daniel Sullivan; Anne Menkens; Laurence Clarke; Guoying Liu
Journal:  Cancer Res       Date:  2005-08-15       Impact factor: 12.701

9.  Specificity of choline metabolites for in vivo diagnosis of breast cancer using 1H MRS at 1.5 T.

Authors:  Peter Stanwell; Laurence Gluch; David Clark; Boguslaw Tomanek; Luke Baker; Bruno Giuffrè; Cynthia Lean; Peter Malycha; Carolyn Mountford
Journal:  Eur Radiol       Date:  2004-09-03       Impact factor: 5.315

Review 10.  Measuring the metabolome: current analytical technologies.

Authors:  Warwick B Dunn; Nigel J C Bailey; Helen E Johnson
Journal:  Analyst       Date:  2005-03-04       Impact factor: 4.616

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  246 in total

Review 1.  Application of metabolomics to prostate cancer.

Authors:  Bruce J Trock
Journal:  Urol Oncol       Date:  2011 Sep-Oct       Impact factor: 3.498

Review 2.  Nuclear morphometry, nucleomics and prostate cancer progression.

Authors:  Robert W Veltri; Christhunesa S Christudass; Sumit Isharwal
Journal:  Asian J Androl       Date:  2012-04-16       Impact factor: 3.285

3.  Global urinary metabolic profiling procedures using gas chromatography-mass spectrometry.

Authors:  Eric Chun Yong Chan; Kishore Kumar Pasikanti; Jeremy K Nicholson
Journal:  Nat Protoc       Date:  2011-09-08       Impact factor: 13.491

Review 4.  p53 and metabolism: old player in a new game.

Authors:  Nirmalya Sen; Yatendra Kumar Satija; Sanjeev Das
Journal:  Transcription       Date:  2012 May-Jun

Review 5.  A review of cancer in U.S. Hispanic populations.

Authors:  Robert W Haile; Esther M John; A Joan Levine; Victoria K Cortessis; Jennifer B Unger; Melissa Gonzales; Elad Ziv; Patricia Thompson; Donna Spruijt-Metz; Katherine L Tucker; Jonine L Bernstein; Thomas E Rohan; Gloria Y F Ho; Melissa L Bondy; Maria Elena Martinez; Linda Cook; Mariana C Stern; Marcia Cruz Correa; Jonelle Wright; Seth J Schwartz; Lourdes Baezconde-Garbanati; Victoria Blinder; Patricia Miranda; Richard Hayes; George Friedman-Jiménez; Kristine R Monroe; Christopher A Haiman; Brian E Henderson; Duncan C Thomas; Paolo Boffetta
Journal:  Cancer Prev Res (Phila)       Date:  2012-02

6.  Stratification of nucleoside analog chemotherapy using 1-(2'-deoxy-2'-18F-fluoro-β-D-arabinofuranosyl)cytosine and 1-(2'-deoxy-2'-18F-fluoro-β-L-arabinofuranosyl)-5-methylcytosine PET.

Authors:  Jason T Lee; Dean O Campbell; Nagichettiar Satyamurthy; Johannes Czernin; Caius G Radu
Journal:  J Nucl Med       Date:  2012-02       Impact factor: 10.057

7.  The down-regulation of miR-125b in chronic lymphocytic leukemias leads to metabolic adaptation of cells to a transformed state.

Authors:  Esmerina Tili; Jean-Jacques Michaille; Zhenghua Luo; Stefano Volinia; Laura Z Rassenti; Thomas J Kipps; Carlo M Croce
Journal:  Blood       Date:  2012-06-21       Impact factor: 22.113

8.  Untargeted Tumor Metabolomics with Liquid Chromatography-Surface-Enhanced Raman Spectroscopy.

Authors:  Lifu Xiao; Chuanqi Wang; Chen Dai; Laurie E Littlepage; Jun Li; Zachary D Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2020-01-27       Impact factor: 15.336

Review 9.  Metabolomic Biomarkers of Prostate Cancer: Prediction, Diagnosis, Progression, Prognosis, and Recurrence.

Authors:  Rachel S Kelly; Matthew G Vander Heiden; Edward Giovannucci; Lorelei A Mucci
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2016-04-06       Impact factor: 4.254

Review 10.  Heterogeneity of glycolysis in cancers and therapeutic opportunities.

Authors:  Marc O Warmoes; Jason W Locasale
Journal:  Biochem Pharmacol       Date:  2014-08-02       Impact factor: 5.858

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