Literature DB >> 19131629

Genetic code supports targeted insertion of two amino acids by one codon.

Anton A Turanov1, Alexey V Lobanov, Dmitri E Fomenko, Hilary G Morrison, Mitchell L Sogin, Lawrence A Klobutcher, Dolph L Hatfield, Vadim N Gladyshev.   

Abstract

Strict one-to-one correspondence between codons and amino acids is thought to be an essential feature of the genetic code. However, we report that one codon can code for two different amino acids with the choice of the inserted amino acid determined by a specific 3' untranslated region structure and location of the dual-function codon within the messenger RNA (mRNA). We found that the codon UGA specifies insertion of selenocysteine and cysteine in the ciliate Euplotes crassus, that the dual use of this codon can occur even within the same gene, and that the structural arrangements of Euplotes mRNA preserve location-dependent dual function of UGA when expressed in mammalian cells. Thus, the genetic code supports the use of one codon to code for multiple amino acids.

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Year:  2009        PMID: 19131629      PMCID: PMC3088105          DOI: 10.1126/science.1164748

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  10 in total

1.  Selenocysteine insertion sequence element characterization and selenoprotein expression.

Authors:  Marla J Berry; Glover W Martin; Roza Tujebajeva; Elisabeth Grundner-Culemann; John B Mansell; Nadya Morozova; John W Harney
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

Review 2.  How selenium has altered our understanding of the genetic code.

Authors:  Dolph L Hatfield; Vadim N Gladyshev
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

Review 3.  Recent evidence for evolution of the genetic code.

Authors:  S Osawa; T H Jukes; K Watanabe; A Muto
Journal:  Microbiol Rev       Date:  1992-03

4.  Translation: duality in the genetic code.

Authors:  John F Atkins; Pavel V Baranov
Journal:  Nature       Date:  2007-08-30       Impact factor: 49.962

5.  UGA is translated as cysteine in pheromone 3 of Euplotes octocarinatus.

Authors:  F Meyer; H J Schmidt; E Plümper; A Hasilik; G Mersmann; H E Meyer; A Engström; K Heckmann
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

6.  Pyrrolysine encoded by UAG in Archaea: charging of a UAG-decoding specialized tRNA.

Authors:  Gayathri Srinivasan; Carey M James; Joseph A Krzycki
Journal:  Science       Date:  2002-05-24       Impact factor: 47.728

7.  A highly efficient form of the selenocysteine insertion sequence element in protozoan parasites and its use in mammalian cells.

Authors:  Sergey V Novoselov; Alexey V Lobanov; Deame Hua; Marina V Kasaikina; Dolph L Hatfield; Vadim N Gladyshev
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-30       Impact factor: 11.205

8.  An expanded genetic code with a functional quadruplet codon.

Authors:  J Christopher Anderson; Ning Wu; Stephen W Santoro; Vishva Lakshman; David S King; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-11       Impact factor: 11.205

Review 9.  Reprogrammed genetic decoding in cellular gene expression.

Authors:  Olivier Namy; Jean-Pierre Rousset; Sawsan Napthine; Ian Brierley
Journal:  Mol Cell       Date:  2004-01-30       Impact factor: 17.970

10.  The 'polysemous' codon--a codon with multiple amino acid assignment caused by dual specificity of tRNA identity.

Authors:  T Suzuki; T Ueda; K Watanabe
Journal:  EMBO J       Date:  1997-03-03       Impact factor: 11.598

  10 in total
  41 in total

Review 1.  Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning.

Authors:  Pavel V Baranov; John F Atkins; Martina M Yordanova
Journal:  Nat Rev Genet       Date:  2015-08-11       Impact factor: 53.242

2.  Selenoprotein K binds multiprotein complexes and is involved in the regulation of endoplasmic reticulum homeostasis.

Authors:  Valentina A Shchedrina; Robert A Everley; Yan Zhang; Steven P Gygi; Dolph L Hatfield; Vadim N Gladyshev
Journal:  J Biol Chem       Date:  2011-10-20       Impact factor: 5.157

Review 3.  Threading the needle: getting selenocysteine into proteins.

Authors:  Jesse Donovan; Paul R Copeland
Journal:  Antioxid Redox Signal       Date:  2010-04-01       Impact factor: 8.401

Review 4.  Selenoproteins: molecular pathways and physiological roles.

Authors:  Vyacheslav M Labunskyy; Dolph L Hatfield; Vadim N Gladyshev
Journal:  Physiol Rev       Date:  2014-07       Impact factor: 37.312

Review 5.  Pathways of Genetic Code Evolution in Ancient and Modern Organisms.

Authors:  Supratim Sengupta; Paul G Higgs
Journal:  J Mol Evol       Date:  2015-06-09       Impact factor: 2.395

Review 6.  The molecular biology of selenocysteine.

Authors:  Jonathan N Gonzalez-Flores; Sumangala P Shetty; Aditi Dubey; Paul R Copeland
Journal:  Biomol Concepts       Date:  2013-08

Review 7.  How tRNAs dictate nuclear codon reassignments: Only a few can capture non-cognate codons.

Authors:  Martin Kollmar; Stefanie Mühlhausen
Journal:  RNA Biol       Date:  2017-01-17       Impact factor: 4.652

8.  Diversity of protein and mRNA forms of mammalian methionine sulfoxide reductase B1 due to intronization and protein processing.

Authors:  Xinwen Liang; Dmitri E Fomenko; Deame Hua; Alaattin Kaya; Vadim N Gladyshev
Journal:  PLoS One       Date:  2010-07-09       Impact factor: 3.240

9.  [Facile Recoding of Selenocysteine in Nature].

Authors:  Takahito Mukai; Markus Englert; H James Tripp; Corwin Miller; Natalia N Ivanova; Edward M Rubin; Nikos C Kyrpides; Dieter Söll
Journal:  Angew Chem Weinheim Bergstr Ger       Date:  2016-03-15

10.  The mitochondrial genomes of the ciliates Euplotes minuta and Euplotes crassus.

Authors:  Rob M de Graaf; Theo A van Alen; Bas E Dutilh; Jan W P Kuiper; Hanneke J A A van Zoggel; Minh Bao Huynh; Hans-Dieter Görtz; Martijn A Huynen; Johannes H P Hackstein
Journal:  BMC Genomics       Date:  2009-11-06       Impact factor: 3.969

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