Literature DB >> 15939356

Bridging the imaging gap: visualizing subcellular architecture with electron tomography.

Sriram Subramaniam1.   

Abstract

Transmission electron microscopy is a powerful tool that is used to explore the internal structure of tissues, cells, organelles and macromolecular complexes. By integrating data from a series of images in which the orientation of the specimen is progressively varied relative to the incident electron beam it is also possible to extend electron microscopic imaging into the third dimension. This approach, commonly referred to as electron tomography, has been greatly aided in recent years by advances in technology for imaging specimens at cryogenic temperatures, as well as by substantial progress in procedures for automated data collection and image processing. The intense pace of developments in this field is inspired, in a large part, by the hope that the quality of the data will ultimately be good enough to allow interpretation of tomograms of cells, organelles, bacteria and viruses in terms of the three-dimensional spatial arrangements of the constituent molecules.

Mesh:

Year:  2005        PMID: 15939356      PMCID: PMC1647296          DOI: 10.1016/j.mib.2005.04.012

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  41 in total

1.  Multicolor and electron microscopic imaging of connexin trafficking.

Authors:  Guido Gaietta; Thomas J Deerinck; Stephen R Adams; James Bouwer; Oded Tour; Dale W Laird; Gina E Sosinsky; Roger Y Tsien; Mark H Ellisman
Journal:  Science       Date:  2002-04-19       Impact factor: 47.728

2.  Three-dimensional structure of herpes simplex virus from cryo-electron tomography.

Authors:  Kay Grünewald; Prashant Desai; Dennis C Winkler; J Bernard Heymann; David M Belnap; Wolfgang Baumeister; Alasdair C Steven
Journal:  Science       Date:  2003-11-21       Impact factor: 47.728

Review 3.  Prospects of electron cryotomography to visualize macromolecular complexes inside cellular compartments: implications of crowding.

Authors:  Kay Grünewald; Ohad Medalia; Ariane Gross; Alasdair C Steven; Wolfgang Baumeister
Journal:  Biophys Chem       Date:  2003       Impact factor: 2.352

4.  Cryo-electron microscopy of vitreous sections of native biological cells and tissues.

Authors:  Ashraf Al-Amoudi; Lars P O Norlen; Jacques Dubochet
Journal:  J Struct Biol       Date:  2004-10       Impact factor: 2.867

5.  Electron tomography of degenerating neurons in mice with abnormal regulation of iron metabolism.

Authors:  Peijun Zhang; William Land; Stanton Lee; Jemma Juliani; Jonathan Lefman; Sophia R Smith; David Germain; Martin Kessel; Richard Leapman; Tracey A Rouault; Sriram Subramaniam
Journal:  J Struct Biol       Date:  2005-05       Impact factor: 2.867

6.  Retrovirus envelope protein complex structure in situ studied by cryo-electron tomography.

Authors:  Friedrich Förster; Ohad Medalia; Nathan Zauberman; Wolfgang Baumeister; Deborah Fass
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-17       Impact factor: 11.205

7.  Improved preservation of ultrastructure in difficult-to-fix organisms by high pressure freezing and freeze substitution: I. Drosophila melanogaster and Strongylocentrotus purpuratus embryos.

Authors:  K McDonald; M K Morphew
Journal:  Microsc Res Tech       Date:  1993-04-15       Impact factor: 2.769

8.  Influence of aldehyde fixation on the morphology of endosomes and lysosomes: quantitative analysis and electron tomography.

Authors:  J L A N Murk; G Posthuma; A J Koster; H J Geuze; A J Verkleij; M J Kleijmeer; B M Humbel
Journal:  J Microsc       Date:  2003-10       Impact factor: 1.758

9.  Direct continuities between cisternae at different levels of the Golgi complex in glucose-stimulated mouse islet beta cells.

Authors:  Brad J Marsh; Niels Volkmann; J Richard McIntosh; Kathryn E Howell
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-02       Impact factor: 11.205

10.  Electron tomographic analysis of somatic cell plate formation in meristematic cells of Arabidopsis preserved by high-pressure freezing.

Authors:  José M Seguí-Simarro; Jotham R Austin; Erin A White; L Andrew Staehelin
Journal:  Plant Cell       Date:  2004-03-12       Impact factor: 11.277

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  31 in total

Review 1.  Electron cryotomography.

Authors:  Elitza I Tocheva; Zhuo Li; Grant J Jensen
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-05-05       Impact factor: 10.005

Review 2.  An intracellular traffic jam: Fc receptor-mediated transport of immunoglobulin G.

Authors:  Devin B Tesar; Pamela J Björkman
Journal:  Curr Opin Struct Biol       Date:  2010-02-18       Impact factor: 6.809

3.  Site-specific 3D imaging of cells and tissues with a dual beam microscope.

Authors:  Jurgen A W Heymann; Mike Hayles; Ingo Gestmann; Lucille A Giannuzzi; Ben Lich; Sriram Subramaniam
Journal:  J Struct Biol       Date:  2006-04-04       Impact factor: 2.867

4.  Single particle cryoelectron tomography characterization of the structure and structural variability of poliovirus-receptor-membrane complex at 30 A resolution.

Authors:  Mihnea Bostina; Doryen Bubeck; Cindi Schwartz; Daniela Nicastro; David J Filman; James M Hogle
Journal:  J Struct Biol       Date:  2007-08-24       Impact factor: 2.867

5.  Segmentation of electron tomographic data sets using fuzzy set theory principles.

Authors:  Edgar Garduño; Mona Wong-Barnum; Niels Volkmann; Mark H Ellisman
Journal:  J Struct Biol       Date:  2008-02-16       Impact factor: 2.867

6.  Cell surface filaments of the gliding bacterium Flavobacterium johnsoniae revealed by cryo-electron tomography.

Authors:  Jun Liu; Mark J McBride; Sriram Subramaniam
Journal:  J Bacteriol       Date:  2007-08-10       Impact factor: 3.490

Review 7.  Exploring photosynthesis by electron tomography.

Authors:  Martin F Hohmann-Marriott; Robert W Roberson
Journal:  Photosynth Res       Date:  2009 Nov-Dec       Impact factor: 3.573

Review 8.  Electron tomography in nanoparticle imaging and analysis.

Authors:  Jeffrey S Lengyel; Jacqueline L S Milne; Sriram Subramaniam
Journal:  Nanomedicine (Lond)       Date:  2008-02       Impact factor: 5.307

9.  Molecular architecture of native HIV-1 gp120 trimers.

Authors:  Jun Liu; Alberto Bartesaghi; Mario J Borgnia; Guillermo Sapiro; Sriram Subramaniam
Journal:  Nature       Date:  2008-07-30       Impact factor: 49.962

10.  Three-dimensional imaging of the highly bent architecture of Bdellovibrio bacteriovorus by using cryo-electron tomography.

Authors:  Mario J Borgnia; Sriram Subramaniam; Jacqueline L S Milne
Journal:  J Bacteriol       Date:  2008-01-18       Impact factor: 3.490

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