Literature DB >> 19072625

Water-benzene interactions: an effective fragment potential and correlated quantum chemistry study.

Lyudmila V Slipchenko1, Mark S Gordon.   

Abstract

Structures and binding in small water-benzene complexes (1-8 water molecules and 1-2 benzene molecules) are studied using the general effective fragment potential (EFP) method. The lowest energy conformers of the clusters were found using a Monte Carlo technique. The binding energies in the smallest clusters (dimers, trimers, and tetramers) were also evaluated with second order perturbation theory (MP2) and coupled cluster theory (CCSD(T)). The EFP method accurately predicts structures and binding energies in the water-benzene complexes. Benzene is polarizable and consequently participates in hydrogen bond networking of water. Since the water-benzene interactions are only slightly weaker than water-water interactions, structures with different numbers of water-water, benzene-water, and benzene-benzene bonds often have very similar binding energies. This is a challenge for computational methods.

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Year:  2009        PMID: 19072625     DOI: 10.1021/jp808845b

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  13 in total

1.  Noncovalent interactions in extended systems described by the effective fragment potential method: theory and application to nucleobase oligomers.

Authors:  Debashree Ghosh; Dmytro Kosenkov; Vitalii Vanovschi; Christopher F Williams; John M Herbert; Mark S Gordon; Michael W Schmidt; Lyudmila V Slipchenko; Anna I Krylov
Journal:  J Phys Chem A       Date:  2010-11-10       Impact factor: 2.781

2.  On the cooperative formation of non-hydrogen-bonded water at molecular hydrophobic interfaces.

Authors:  Joel G Davis; Blake M Rankin; Kamil P Gierszal; Dor Ben-Amotz
Journal:  Nat Chem       Date:  2013-07-21       Impact factor: 24.427

3.  Co-operativity in non-covalent interactions in ternary complexes: a comprehensive electronic structure theory based investigation.

Authors:  Shyam Vinod Kumar Panneer; Mahesh Kumar Ravva; Brijesh Kumar Mishra; Venkatesan Subramanian; Narayanasami Sathyamurthy
Journal:  J Mol Model       Date:  2018-08-29       Impact factor: 1.810

4.  Natures of benzene-water and pyrrole-water interactions in the forms of σ and π types: theoretical studies from clusters to liquid mixture.

Authors:  Wei Gao; Jiqing Jiao; Huajie Feng; Xiaopeng Xuan; Liuping Chen
Journal:  J Mol Model       Date:  2012-11-23       Impact factor: 1.810

5.  An Efficient Method to Evaluate Intermolecular Interaction Energies in Large Systems Using Overlapping Multicenter ONIOM and the Fragment Molecular Orbital Method.

Authors:  Naoya Asada; Dmitri G Fedorov; Kazuo Kitaura; Isao Nakanishi; Kenneth M Merz
Journal:  J Phys Chem Lett       Date:  2012-08-28       Impact factor: 6.475

6.  Effect of solvation on the vertical ionization energy of thymine: from microhydration to bulk.

Authors:  Debashree Ghosh; Olexandr Isayev; Lyudmila V Slipchenko; Anna I Krylov
Journal:  J Phys Chem A       Date:  2011-04-18       Impact factor: 2.781

7.  Exploring Adsorption of Water and Ions on Carbon Surfaces using a Polarizable Force Field.

Authors:  Patric Schyman; William L Jorgensen
Journal:  J Phys Chem Lett       Date:  2013-01-17       Impact factor: 6.475

8.  Capturing Many-Body Interactions with Classical Dipole Induction Models.

Authors:  Chengwen Liu; Rui Qi; Qiantao Wang; J-P Piquemal; Pengyu Ren
Journal:  J Chem Theory Comput       Date:  2017-05-12       Impact factor: 6.006

9.  Hydration of Aromatic Heterocycles as an Adversary of π-Stacking.

Authors:  Johannes R Loeffler; Michael Schauperl; Klaus R Liedl
Journal:  J Chem Inf Model       Date:  2019-10-17       Impact factor: 6.162

10.  Exploring amino acid functions in a deep mutational landscape.

Authors:  Alistair S Dunham; Pedro Beltrao
Journal:  Mol Syst Biol       Date:  2021-07       Impact factor: 11.429

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