Literature DB >> 22232680

Phytochrome regulates translation of mRNA in the cytosol.

Inyup Paik1, Seungchan Yang, Giltsu Choi.   

Abstract

An array of photoreceptors including cryptochromes, phototropin, and phytochromes regulates various light responses in plants. Among these photoreceptors, phytochromes perceive red and far-red light by switching between two interconvertible spectral forms (Pr and Pfr). The Pfr form promotes light responses partly by destabilizing negatively acting, phytochrome-interacting basic helix-loop-helix transcription factors (PIFs), thus modulating transcription in the nucleus. The Pfr form is also present in the cytosol. However, the role of phytochromes in the cytosol is not well understood. Here we show that the Pfr form interacts with the cytosolic protein PENTA1 (PNT1) and inhibits the translation of protochlorophyllide reductase (PORA) mRNA. PNT1 possesses five C3H-type zinc finger domains and displays similarity to various RNA binding proteins including Tristetraprolin, which regulates stabilities of mRNAs such as TNF-α mRNA in humans. Consistent with its function as an RNA binding protein, PNT1 directly binds to mRNA of a key chlorophyll biosynthetic gene, protochlorophyllide reductase in vivo and inhibits the translation of PORA mRNA in the presence of phytochromes. The present results demonstrate that phytochromes transmit light signals to regulate not only transcription in the nucleus through PIFs, but also translation in the cytosol through PNT1.

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Year:  2012        PMID: 22232680      PMCID: PMC3268310          DOI: 10.1073/pnas.1109683109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  51 in total

1.  Degradation of phytochrome interacting factor 3 in phytochrome-mediated light signaling.

Authors:  Eunae Park; Jonghyun Kim; Yeon Lee; Jieun Shin; Eunkyoo Oh; Won-Il Chung; Jang Ryul Liu; Giltsu Choi
Journal:  Plant Cell Physiol       Date:  2004-08       Impact factor: 4.927

Review 2.  Decoding of light signals by plant phytochromes and their interacting proteins.

Authors:  Gabyong Bae; Giltsu Choi
Journal:  Annu Rev Plant Biol       Date:  2008       Impact factor: 26.379

Review 3.  Translation initiation factors: a weak link in plant RNA virus infection.

Authors:  Christophe Robaglia; Carole Caranta
Journal:  Trends Plant Sci       Date:  2005-12-15       Impact factor: 18.313

4.  Eukaryotic phytochromes: light-regulated serine/threonine protein kinases with histidine kinase ancestry.

Authors:  K C Yeh; J C Lagarias
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

5.  PHYTOCHROME KINASE SUBSTRATE 1 is a phototropin 1 binding protein required for phototropism.

Authors:  Patricia Lariguet; Isabelle Schepens; Daniel Hodgson; Ullas V Pedmale; Martine Trevisan; Chitose Kami; Matthieu de Carbonnel; José M Alonso; Joseph R Ecker; Emmanuel Liscum; Christian Fankhauser
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-15       Impact factor: 11.205

6.  Characterization of a set of phytochrome-interacting factor-like bHLH proteins in Oryza sativa.

Authors:  Yuko Nakamura; Takahiko Kato; Takafumi Yamashino; Masaya Murakami; Takeshi Mizuno
Journal:  Biosci Biotechnol Biochem       Date:  2007-05-07       Impact factor: 2.043

7.  Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.

Authors:  Suhua Feng; Cristina Martinez; Giuliana Gusmaroli; Yu Wang; Junli Zhou; Feng Wang; Liying Chen; Lu Yu; Juan M Iglesias-Pedraz; Stefan Kircher; Eberhard Schäfer; Xiangdong Fu; Liu-Min Fan; Xing Wang Deng
Journal:  Nature       Date:  2008-01-24       Impact factor: 49.962

8.  Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis.

Authors:  Diana Bauer; András Viczián; Stefan Kircher; Tabea Nobis; Roland Nitschke; Tim Kunkel; Kishore C S Panigrahi; Eva Adám; Erzsébet Fejes; Eberhard Schäfer; Ferenc Nagy
Journal:  Plant Cell       Date:  2004-05-21       Impact factor: 11.277

9.  Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness.

Authors:  Pablo Leivar; Elena Monte; Yoshito Oka; Tiffany Liu; Christine Carle; Alicia Castillon; Enamul Huq; Peter H Quail
Journal:  Curr Biol       Date:  2008-12-09       Impact factor: 10.834

10.  Genome-wide survey and expression profiling of CCCH-zinc finger family reveals a functional module in macrophage activation.

Authors:  Jian Liang; Wenjun Song; Gail Tromp; Pappachan E Kolattukudy; Mingui Fu
Journal:  PLoS One       Date:  2008-08-06       Impact factor: 3.240

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  28 in total

1.  A phytochrome-phototropin light signaling complex at the plasma membrane.

Authors:  Katharina Jaedicke; Anna Lena Lichtenthäler; Rabea Meyberg; Mathias Zeidler; Jon Hughes
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-05       Impact factor: 11.205

2.  Translational Regulation of Cytoplasmic mRNAs.

Authors:  Bijoyita Roy; Albrecht G von Arnim
Journal:  Arabidopsis Book       Date:  2013-07-18

3.  A Constitutively Active Allele of Phytochrome B Maintains Circadian Robustness in the Absence of Light.

Authors:  Matthew Alan Jones; Wei Hu; Suzanne Litthauer; J Clark Lagarias; Stacey Lynn Harmer
Journal:  Plant Physiol       Date:  2015-07-08       Impact factor: 8.340

4.  PHYTOCHROME INTERACTING FACTOR1 Enhances the E3 Ligase Activity of CONSTITUTIVE PHOTOMORPHOGENIC1 to Synergistically Repress Photomorphogenesis in Arabidopsis.

Authors:  Xiaosa Xu; Inyup Paik; Ling Zhu; Qingyun Bu; Xi Huang; Xing Wang Deng; Enamul Huq
Journal:  Plant Cell       Date:  2014-05-23       Impact factor: 11.277

5.  PHYTOCHROME-DEPENDENT LATE-FLOWERING accelerates flowering through physical interactions with phytochrome B and CONSTANS.

Authors:  Motomu Endo; Yoshiyasu Tanigawa; Tadashi Murakami; Takashi Araki; Akira Nagatani
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-14       Impact factor: 11.205

6.  Phytochrome controls alternative splicing to mediate light responses in Arabidopsis.

Authors:  Hiromasa Shikata; Kousuke Hanada; Tomokazu Ushijima; Moeko Nakashima; Yutaka Suzuki; Tomonao Matsushita
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-15       Impact factor: 11.205

7.  Alternative Splicing Substantially Diversifies the Transcriptome during Early Photomorphogenesis and Correlates with the Energy Availability in Arabidopsis.

Authors:  Lisa Hartmann; Philipp Drewe-Boß; Theresa Wießner; Gabriele Wagner; Sascha Geue; Hsin-Chieh Lee; Dominik M Obermüller; André Kahles; Jonas Behr; Fabian H Sinz; Gunnar Rätsch; Andreas Wachter
Journal:  Plant Cell       Date:  2016-11-01       Impact factor: 11.277

Review 8.  Light Perception: A Matter of Time.

Authors:  Sabrina E Sanchez; Matias L Rugnone; Steve A Kay
Journal:  Mol Plant       Date:  2020-02-14       Impact factor: 13.164

9.  The phytochrome-interacting vascular plant one-zinc finger1 and VOZ2 redundantly regulate flowering in Arabidopsis.

Authors:  Yukiko Yasui; Keiko Mukougawa; Mitsuhiro Uemoto; Akira Yokofuji; Ryota Suzuri; Aiko Nishitani; Takayuki Kohchi
Journal:  Plant Cell       Date:  2012-08-17       Impact factor: 11.277

10.  DELLA proteins and their interacting RING Finger proteins repress gibberellin responses by binding to the promoters of a subset of gibberellin-responsive genes in Arabidopsis.

Authors:  Jeongmoo Park; Khoa Thi Nguyen; Eunae Park; Jong-Seong Jeon; Giltsu Choi
Journal:  Plant Cell       Date:  2013-03-12       Impact factor: 11.277

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