Literature DB >> 12006496

PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis.

Enamul Huq1, Peter H Quail.   

Abstract

Plants sense and respond to red and far-red light using the phytochrome (phy) family of photoreceptors. However, the mechanism of light signal transduction is not well defined. Here, we report the identification of a new mutant Arabidopsis locus, srl2 (short under red-light 2), which confers selective hypersensitivity to continuous red, but not far-red, light. This hypersensitivity is eliminated in srl2phyB, but not srl2phyA, double mutants, indicating that this locus functions selectively and negatively in phyB signaling. The SRL2 gene encodes a bHLH factor, designated PIF4 (phytochrome-interacting factor 4), which binds selectively to the biologically active Pfr form of phyB, but has little affinity for phyA. Despite its hypersensitive morphological phenotype, the srl2 mutant displays no perturbation of light-induced expression of marker genes for chloroplast development. These data suggest that PIF4 may function specifically in a branch of the phyB signaling network that regulates a subset of genes involved in cell expansion. Consistent with this proposal, PIF4 localizes to the nucleus and can bind to a G-box DNA sequence motif found in various light-regulated promoters.

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Year:  2002        PMID: 12006496      PMCID: PMC126004          DOI: 10.1093/emboj/21.10.2441

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  48 in total

Review 1.  The phytochromes, a family of red/far-red absorbing photoreceptors.

Authors:  C Fankhauser
Journal:  J Biol Chem       Date:  2001-02-16       Impact factor: 5.157

Review 2.  Phytochrome-interacting factors.

Authors:  P H Quail
Journal:  Semin Cell Dev Biol       Date:  2000-12       Impact factor: 7.727

Review 3.  The genetics of phytochrome signalling in Arabidopsis.

Authors:  M E Hudson
Journal:  Semin Cell Dev Biol       Date:  2000-12       Impact factor: 7.727

Review 4.  Phytochromes and light signal perception by plants--an emerging synthesis.

Authors:  H Smith
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

5.  EARLY FLOWERING3 encodes a novel protein that regulates circadian clock function and flowering in Arabidopsis.

Authors:  K A Hicks; T M Albertson; D R Wagner
Journal:  Plant Cell       Date:  2001-06       Impact factor: 11.277

6.  The pef mutants of Arabidopsis thaliana define lesions early in the phytochrome signaling pathway.

Authors:  M Ahmad; A R Cashmore
Journal:  Plant J       Date:  1996-12       Impact factor: 6.417

7.  Twin autonomous bipartite nuclear localization signals direct nuclear import of GT-2.

Authors:  K Dehesh; L G Smith; J M Tepperman; P H Quail
Journal:  Plant J       Date:  1995-07       Impact factor: 6.417

8.  Arabidopsis nph1 and npl1: blue light receptors that mediate both phototropism and chloroplast relocation.

Authors:  T Sakai; T Kagawa; M Kasahara; T E Swartz; J M Christie; W R Briggs; M Wada; K Okada
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-22       Impact factor: 11.205

9.  RED1 is necessary for phytochrome B-mediated red light-specific signal transduction in Arabidopsis.

Authors:  D Wagner; U Hoecker; P H Quail
Journal:  Plant Cell       Date:  1997-05       Impact factor: 11.277

10.  Shade avoidance responses are mediated by the ATHB-2 HD-zip protein, a negative regulator of gene expression.

Authors:  C Steindler; A Matteucci; G Sessa; T Weimar; M Ohgishi; T Aoyama; G Morelli; I Ruberti
Journal:  Development       Date:  1999-10       Impact factor: 6.868

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  204 in total

Review 1.  Phytochrome-mediated photoperception and signal transduction in higher plants.

Authors:  Eberhard Schafer; Chris Bowle
Journal:  EMBO Rep       Date:  2002-11       Impact factor: 8.807

2.  BBX32, an Arabidopsis B-Box protein, functions in light signaling by suppressing HY5-regulated gene expression and interacting with STH2/BBX21.

Authors:  Hans E Holtan; Simona Bandong; Colleen M Marion; Luc Adam; Shiv Tiwari; Yu Shen; Julin N Maloof; Don R Maszle; Masa-Aki Ohto; Sasha Preuss; Rob Meister; Marie Petracek; Peter P Repetti; T Lynne Reuber; Oliver J Ratcliffe; Rajnish Khanna
Journal:  Plant Physiol       Date:  2011-06-01       Impact factor: 8.340

3.  Overexpression of a mutant basic helix-loop-helix protein HFR1, HFR1-deltaN105, activates a branch pathway of light signaling in Arabidopsis.

Authors:  Ki-Young Yang; Young-Mi Kim; Seunghee Lee; Pill-Soon Song; Moon-Soo Soh
Journal:  Plant Physiol       Date:  2003-11-26       Impact factor: 8.340

4.  A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development.

Authors:  Yuling Jiao; Hongjuan Yang; Ligeng Ma; Ning Sun; Haiyuan Yu; Tie Liu; Ying Gao; Hongya Gu; Zhangliang Chen; Masamitsu Wada; Mark Gerstein; Hongyu Zhao; Li-Jia Qu; Xing Wang Deng
Journal:  Plant Physiol       Date:  2003-11-06       Impact factor: 8.340

5.  Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.

Authors:  Paul C Bailey; Cathie Martin; Gabriela Toledo-Ortiz; Peter H Quail; Enamul Huq; Marc A Heim; Marc Jakoby; Martin Werber; Bernd Weisshaar
Journal:  Plant Cell       Date:  2003-11       Impact factor: 11.277

6.  Identification of promoter motifs involved in the network of phytochrome A-regulated gene expression by combined analysis of genomic sequence and microarray data.

Authors:  Matthew E Hudson; Peter H Quail
Journal:  Plant Physiol       Date:  2003-12       Impact factor: 8.340

7.  Gibberellin biosynthesis and response during Arabidopsis seed germination.

Authors:  Mikihiro Ogawa; Atsushi Hanada; Yukika Yamauchi; Ayuko Kuwahara; Yuji Kamiya; Shinjiro Yamaguchi
Journal:  Plant Cell       Date:  2003-07       Impact factor: 11.277

8.  A quartet of PIF bHLH factors provides a transcriptionally centered signaling hub that regulates seedling morphogenesis through differential expression-patterning of shared target genes in Arabidopsis.

Authors:  Yu Zhang; Oleg Mayba; Anne Pfeiffer; Hui Shi; James M Tepperman; Terence P Speed; Peter H Quail
Journal:  PLoS Genet       Date:  2013-01-31       Impact factor: 5.917

9.  PIL5, a phytochrome-interacting basic helix-loop-helix protein, is a key negative regulator of seed germination in Arabidopsis thaliana.

Authors:  Eunkyoo Oh; Jonghyun Kim; Eunae Park; Jeong-Il Kim; Changwon Kang; Giltsu Choi
Journal:  Plant Cell       Date:  2004-10-14       Impact factor: 11.277

10.  A novel molecular recognition motif necessary for targeting photoactivated phytochrome signaling to specific basic helix-loop-helix transcription factors.

Authors:  Rajnish Khanna; Enamul Huq; Elise A Kikis; Bassem Al-Sady; Christina Lanzatella; Peter H Quail
Journal:  Plant Cell       Date:  2004-10-14       Impact factor: 11.277

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