Literature DB >> 19053417

Ribosomal synthesis of polypeptoids and peptoid-peptide hybrids.

Takashi Kawakami1, Hiroshi Murakami, Hiroaki Suga.   

Abstract

Here we report a new methodology for mRNA-programmed synthesis of peptoids and peptoid-peptide hybrids by means of translation machinery under the reprogrammed genetic code. We initially screened N-substituted glycines (rGly) for their single incorporation into a nascent peptide chain and found translation machinery accepts a variety of rGly for elongation. Moreover, we have shown consecutive elongations of rGly and mRNA-directed synthesis of cyclic peptoid-peptide hybrids. This methodology offers a powerful tool for mRNA-programmed library synthesis of peptoids and peptoid-peptide hybrids with linear and cyclic scaffolds, potentially leading to the discovery of drug candidates with proteolytic stability and membrane permeability.

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Year:  2008        PMID: 19053417     DOI: 10.1021/ja806998v

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  17 in total

1.  Flexizymes for genetic code reprogramming.

Authors:  Yuki Goto; Takayuki Katoh; Hiroaki Suga
Journal:  Nat Protoc       Date:  2011-05-12       Impact factor: 13.491

2.  The RNA origin of transfer RNA aminoacylation and beyond.

Authors:  Hiroaki Suga; Gosuke Hayashi; Naohiro Terasaka
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

Review 3.  Trends in peptide drug discovery.

Authors:  Markus Muttenthaler; Glenn F King; David J Adams; Paul F Alewood
Journal:  Nat Rev Drug Discov       Date:  2021-02-03       Impact factor: 84.694

Review 4.  tRNA engineering for manipulating genetic code.

Authors:  Takayuki Katoh; Yoshihiko Iwane; Hiroaki Suga
Journal:  RNA Biol       Date:  2017-09-06       Impact factor: 4.652

5.  Development of homomultimers and heteromultimers of lung cancer-specific peptoids.

Authors:  Jared C Hooks; Jaya P Matharage; D Gomika Udugamasooriya
Journal:  Biopolymers       Date:  2011       Impact factor: 2.505

Review 6.  Repurposing ribosomes for synthetic biology.

Authors:  Yi Liu; Do Soon Kim; Michael C Jewett
Journal:  Curr Opin Chem Biol       Date:  2017-09-01       Impact factor: 8.822

7.  Changeability of individual domains of an aminoacyl-tRNA in polymerization by the ribosome.

Authors:  Rong Gao; Anthony C Forster
Journal:  FEBS Lett       Date:  2010-01-04       Impact factor: 4.124

8.  Diverse backbone-cyclized peptides via codon reprogramming.

Authors:  Takashi Kawakami; Atsushi Ohta; Masaki Ohuchi; Hiroshi Ashigai; Hiroshi Murakami; Hiroaki Suga
Journal:  Nat Chem Biol       Date:  2009-10-25       Impact factor: 15.040

9.  Using the ribosome to synthesize peptidomimetics.

Authors:  Roger M Freidinger
Journal:  F1000 Biol Rep       Date:  2009-07-08

10.  Genetically encoded libraries of nonstandard peptides.

Authors:  Takashi Kawakami; Hiroshi Murakami
Journal:  J Nucleic Acids       Date:  2012-10-14
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