Literature DB >> 19050847

Molecular mapping in oil radish (Raphanus sativus L.) and QTL analysis of resistance against beet cyst nematode (Heterodera schachtii).

Holger Budahn1, Herbert Peterka, Magdi Ali Ahmed Mousa, Yunhua Ding, Shaosong Zhang, Jinbin Li.   

Abstract

The beet cyst nematode (Heterodera schachtii Schmidt) can be controlled biologically in highly infected soils of sugar beet rotations using resistant varieties of oil radish (Raphanus sativus L. ssp. oleiferus DC.) as a green crop. Resistant plants stimulate infective juveniles to invade roots, but prevent them after their penetration to complete the life cycle. The resistance trait has been transferred successfully to susceptible rapeseed by the addition of a complete radish chromosome. The aim of the study was to construct a genetic map for radish and to develop resistance-associated markers. The map with 545 RAPD, dpRAPD, AFLP and SSR markers had a length of 1,517 cM, a mean distance of 2.8 cM and consisted of nine linkage groups having sizes between 120 and 232 cM. Chromosome-specific markers for the resistance-bearing chromosome d and the other eight radish chromosomes, developed previously from a series of rapeseed-radish addition lines, were enclosed as anchor markers. Each of the extra chromosomes in the addition lines could be unambiguously assigned to one of the radish linkage groups. The QTL analysis of nematode resistance was realized in the intraspecific F(2) mapping population derived from a cross between varieties 'Pegletta' (nematode resistant) x 'Siletta Nova' (susceptible). A dominant major QTL Hs1( Rph ) explaining 46.4% of the phenotypic variability was detected in a proximal position of chromosome d. Radish chromosome-specific anchor markers with known map positions were made available for future recombination experiments to incorporate segments carrying desired genes as Hs1( Rph ) from radish into rapeseed by means of chromosome addition lines.

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Year:  2008        PMID: 19050847     DOI: 10.1007/s00122-008-0937-6

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  16 in total

Review 1.  Gene expression in nematode feeding sites.

Authors:  Godelieve Gheysen; Carmen Fenoll
Journal:  Annu Rev Phytopathol       Date:  2002-02-20       Impact factor: 13.078

2.  A Genetic Method for Detecting Induced Intergeneric Translocations.

Authors:  C J Driscoll; N F Jensen
Journal:  Genetics       Date:  1963-04       Impact factor: 4.562

3.  Transfer of resistance to the beet cyst nematode (Heterodera schachtii Schm.) into the Brassica napus L. gene pool through intergeneric somatic hybridization with Raphanus sativus L.

Authors:  C L Lelivelt; F A Krens
Journal:  Theor Appl Genet       Date:  1992-04       Impact factor: 5.699

4.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

5.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

6.  Molecular aspects of cyst nematodes.

Authors:  Catherine J Lilley; Howard J Atkinson; Peter E Urwin
Journal:  Mol Plant Pathol       Date:  2005-11-01       Impact factor: 5.663

7.  Isolation and characterization of microsatellites in Brassica rapa L.

Authors:  K. Suwabe; H. Iketani; T. Nunome; T. Kage; M. Hirai
Journal:  Theor Appl Genet       Date:  2002-04-05       Impact factor: 5.699

8.  Transmission of maize chromosome 9 rearrangements in oat-maize radiation hybrids.

Authors:  M Isabel Vales; Oscar Riera-Lizarazu; Howard W Rines; Ronald L Phillips
Journal:  Genome       Date:  2004-12       Impact factor: 2.166

9.  Reproduction of Heterodera schachtii Schmidt on Resistant Mustard, Radish, and Sugar Beet Cultivars.

Authors:  Heidi J Smith; Fred A Gray; David W Koch
Journal:  J Nematol       Date:  2004-06       Impact factor: 1.402

10.  Transfer of resistance against the beet cyst nematode from radish (Raphanus sativus) to rape (Brassica napus) by monosomic chromosome addition.

Authors:  H Peterka; H Budahn; O Schrader; R Ahne; W Schütze
Journal:  Theor Appl Genet       Date:  2004-02-27       Impact factor: 5.699

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  16 in total

Review 1.  Integrated signaling networks in plant responses to sedentary endoparasitic nematodes: a perspective.

Authors:  Ruijuan Li; Aaron M Rashotte; Narendra K Singh; David B Weaver; Kathy S Lawrence; Robert D Locy
Journal:  Plant Cell Rep       Date:  2014-09-11       Impact factor: 4.570

2.  Construction of a high-resolution linkage map of Rfd1, a restorer-of-fertility locus for cytoplasmic male sterility conferred by DCGMS cytoplasm in radish (Raphanus sativus L.) using synteny between radish and Arabidopsis genomes.

Authors:  Youngcho Cho; Young-Pyo Lee; Beom-Seok Park; Tae-Ho Han; Sunggil Kim
Journal:  Theor Appl Genet       Date:  2012-03-21       Impact factor: 5.699

3.  Construction of a reference genetic map of Raphanus sativus based on genotyping by whole-genome resequencing.

Authors:  Jeong-Hwan Mun; Hee Chung; Won-Hyong Chung; Mijin Oh; Young-Min Jeong; Namshin Kim; Byung Ohg Ahn; Beom-Seok Park; Suhyoung Park; Ki-Byung Lim; Yoon-Jung Hwang; Hee-Ju Yu
Journal:  Theor Appl Genet       Date:  2014-11-18       Impact factor: 5.699

4.  Genetic linkage map construction and QTL mapping of cadmium accumulation in radish (Raphanus sativus L.).

Authors:  Liang Xu; Liangju Wang; Yiqin Gong; Wenhao Dai; Yan Wang; Xianwen Zhu; Tiancai Wen; Liwang Liu
Journal:  Theor Appl Genet       Date:  2012-04-11       Impact factor: 5.699

5.  Comparative mapping of Raphanus sativus genome using Brassica markers and quantitative trait loci analysis for the Fusarium wilt resistance trait.

Authors:  Xiaona Yu; Su Ryun Choi; Nirala Ramchiary; Xinyang Miao; Su Hee Lee; Hae Jeong Sun; Sunggil Kim; Chun Hee Ahn; Yong Pyo Lim
Journal:  Theor Appl Genet       Date:  2013-07-18       Impact factor: 5.699

6.  Construction of a chromosome-assigned, sequence-tagged linkage map for the radish, Raphanus sativus L. and QTL analysis of morphological traits.

Authors:  Tomoko Hashida; Ryoichi Nakatsuji; Holger Budahn; Otto Schrader; Herbert Peterka; Tatsuhito Fujimura; Nakao Kubo; Masashi Hirai
Journal:  Breed Sci       Date:  2013-06-01       Impact factor: 2.086

7.  An EST-SSR linkage map of Raphanus sativus and comparative genomics of the Brassicaceae.

Authors:  Kenta Shirasawa; Maki Oyama; Hideki Hirakawa; Shusei Sato; Satoshi Tabata; Takashi Fujioka; Chiaki Kimizuka-Takagi; Shigemi Sasamoto; Akiko Watanabe; Midori Kato; Yoshie Kishida; Mitsuyo Kohara; Chika Takahashi; Hisano Tsuruoka; Tsuyuko Wada; Takako Sakai; Sachiko Isobe
Journal:  DNA Res       Date:  2011-06-13       Impact factor: 4.458

8.  Extensive chromosome homoeology among Brassiceae species were revealed by comparative genetic mapping with high-density EST-based SNP markers in radish (Raphanus sativus L.).

Authors:  Feng Li; Yoichi Hasegawa; Masako Saito; Sachiko Shirasawa; Aki Fukushima; Toyoaki Ito; Hiroshi Fujii; Sachie Kishitani; Hiroyasu Kitashiba; Takeshi Nishio
Journal:  DNA Res       Date:  2011-08-04       Impact factor: 4.458

9.  Development of genomic and EST-SSR markers in radish (Raphanus sativus L.).

Authors:  Ryoichi Nakatsuji; Tomoko Hashida; Naoko Matsumoto; Masato Tsuro; Nakao Kubo; Masashi Hirai
Journal:  Breed Sci       Date:  2011-12-15       Impact factor: 2.086

10.  QTL analysis using SNP markers developed by next-generation sequencing for identification of candidate genes controlling 4-methylthio-3-butenyl glucosinolate contents in roots of radish, Raphanus sativus L.

Authors:  Zhongwei Zou; Masahiko Ishida; Feng Li; Tomohiro Kakizaki; Sho Suzuki; Hiroyasu Kitashiba; Takeshi Nishio
Journal:  PLoS One       Date:  2013-01-07       Impact factor: 3.240

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