Literature DB >> 19041879

alphaB-crystallin: a hybrid solid-state/solution-state NMR investigation reveals structural aspects of the heterogeneous oligomer.

Stefan Jehle1, Barth van Rossum, Joseph R Stout, Satoshi M Noguchi, Katja Falber, Kristina Rehbein, Hartmut Oschkinat, Rachel E Klevit, Ponni Rajagopal.   

Abstract

Atomic-level structural information on alphaB-Crystallin (alphaB), a prominent member of the small heat-shock protein family, has been a challenge to obtain due its polydisperse oligomeric nature. We show that magic-angle spinning solid-state NMR can be used to obtain high-resolution information on an approximately 580-kDa human alphaB assembled from 175-residue 20-kDa subunits. An approximately 100-residue alpha-crystallin domain is common to all small heat-shock proteins, and solution-state NMR was performed on two different alpha-crystallin domain constructs isolated from alphaB. In vitro, the chaperone-like activities of full-length alphaB and the isolated alpha-crystallin domain are identical. Chemical shifts of the backbone and C(beta) resonances have been obtained for residues 64-162 (alpha-crystallin domain plus part of the C-terminus) in alphaB and the isolated alpha-crystallin domain by solid-state and solution-state NMR, respectively. Both sets of data strongly predict six beta-strands in the alpha-crystallin domain. A majority of residues in the alpha-crystallin domain have similar chemical shifts in both solid-state and solution-state, indicating similar structures for the domain in its isolated and oligomeric forms. Sites of intersubunit interaction are identified from chemical shift differences that cluster to specific regions of the alpha-crystallin domain. Multiple signals are observed for the resonances of M68 in the oligomer, identifying the region containing this residue as existing in heterogeneous environments within alphaB. Evidence for a novel dimerization motif in the human alpha-crystallin domain is obtained by a comparison of (i) solid-state and solution-state chemical shift data and (ii) (1)H-(15)N heteronuclear single quantum coherence spectra as a function of pH. The isolated alpha-crystallin domain undergoes a dimer-monomer transition over the pH range 7.5-6.8. This steep pH-dependent switch may be important for alphaB to function optimally (e.g., to preserve the filament integrity of cardiac muscle proteins such as actin and desmin during cardiac ischemia, which is accompanied by acidosis).

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Year:  2008        PMID: 19041879      PMCID: PMC2692910          DOI: 10.1016/j.jmb.2008.10.097

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  53 in total

1.  Alpha B-crystallin in cardiac tissue. Association with actin and desmin filaments.

Authors:  F Bennardini; A Wrzosek; M Chiesi
Journal:  Circ Res       Date:  1992-08       Impact factor: 17.367

2.  Wrapping the alpha-crystallin domain fold in a chaperone assembly.

Authors:  Robin Stamler; Guido Kappé; Wilbert Boelens; Christine Slingsby
Journal:  J Mol Biol       Date:  2005-10-14       Impact factor: 5.469

3.  Protein structure determination by high-resolution solid-state NMR spectroscopy: application to microcrystalline ubiquitin.

Authors:  Stephan G Zech; A Joshua Wand; Ann E McDermott
Journal:  J Am Chem Soc       Date:  2005-06-22       Impact factor: 15.419

4.  De novo high-resolution protein structure determination from sparse spin-labeling EPR data.

Authors:  Nathan Alexander; Marco Bortolus; Ahmad Al-Mestarihi; Hassane Mchaourab; Jens Meiler
Journal:  Structure       Date:  2008-02       Impact factor: 5.006

5.  High-resolution solid-state NMR studies on uniformly [13C,15N]-labeled ubiquitin.

Authors:  Karsten Seidel; Manuel Etzkorn; Henrike Heise; Stefan Becker; Marc Baldus
Journal:  Chembiochem       Date:  2005-09       Impact factor: 3.164

6.  Strict co-linearity of genetic and protein folding domains in an intragenically duplicated rat lens gamma-crystallin gene.

Authors:  R J Moormann; J T den Dunnen; L Mulleners; P Andreoli; H Bloemendal; J G Schoenmakers
Journal:  J Mol Biol       Date:  1983-12-25       Impact factor: 5.469

7.  Altered Na,K-ATPase pattern in gamma-crystallin mutant mice.

Authors:  Amy Moseley; Jochen Graw; Nicholas A Delamere
Journal:  Invest Ophthalmol Vis Sci       Date:  2002-05       Impact factor: 4.799

8.  Dipole tensor-based atomic-resolution structure determination of a nanocrystalline protein by solid-state NMR.

Authors:  W Trent Franks; Benjamin J Wylie; Heather L Frericks Schmidt; Andrew J Nieuwkoop; Rebecca-Maria Mayrhofer; Gautam J Shah; Daniel T Graesser; Chad M Rienstra
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-14       Impact factor: 11.205

9.  J-deconvolution using maximum entropy reconstruction applied to 13C-13C solid-state cross-polarization magic-angle-spinning NMR of proteins.

Authors:  Ingo Scholz; Stefan Jehle; Peter Schmieder; Matthias Hiller; Frank Eisenmenger; Hartmut Oschkinat; Barth-Jan van Rossum
Journal:  J Am Chem Soc       Date:  2007-05-09       Impact factor: 15.419

10.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

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  54 in total

1.  Structural and mechanistic implications of metal binding in the small heat-shock protein αB-crystallin.

Authors:  Andi Mainz; Benjamin Bardiaux; Frank Kuppler; Gerd Multhaup; Isabella C Felli; Roberta Pierattelli; Bernd Reif
Journal:  J Biol Chem       Date:  2011-11-15       Impact factor: 5.157

2.  Crystal structures of truncated alphaA and alphaB crystallins reveal structural mechanisms of polydispersity important for eye lens function.

Authors:  Arthur Laganowsky; Justin L P Benesch; Meytal Landau; Linlin Ding; Michael R Sawaya; Duilio Cascio; Qingling Huang; Carol V Robinson; Joseph Horwitz; David Eisenberg
Journal:  Protein Sci       Date:  2010-05       Impact factor: 6.725

3.  The chaperone αB-crystallin uses different interfaces to capture an amorphous and an amyloid client.

Authors:  Andi Mainz; Jirka Peschek; Maria Stavropoulou; Katrin C Back; Benjamin Bardiaux; Sam Asami; Elke Prade; Carsten Peters; Sevil Weinkauf; Johannes Buchner; Bernd Reif
Journal:  Nat Struct Mol Biol       Date:  2015-10-12       Impact factor: 15.369

4.  Structural and dynamical characterization of tubular HIV-1 capsid protein assemblies by solid state nuclear magnetic resonance and electron microscopy.

Authors:  Bo Chen; Robert Tycko
Journal:  Protein Sci       Date:  2010-04       Impact factor: 6.725

5.  Cryogenic temperature effects and resolution upon slow cooling of protein preparations in solid state NMR.

Authors:  Arne H Linden; W Trent Franks; Ümit Akbey; Sascha Lange; Barth-Jan van Rossum; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2011-08-09       Impact factor: 2.835

6.  Extensive de novo solid-state NMR assignments of the 33 kDa C-terminal domain of the Ure2 prion.

Authors:  Birgit Habenstein; Christian Wasmer; Luc Bousset; Yannick Sourigues; Anne Schütz; Antoine Loquet; Beat H Meier; Ronald Melki; Anja Böckmann
Journal:  J Biomol NMR       Date:  2011-07-31       Impact factor: 2.835

7.  N-terminal domain of alphaB-crystallin provides a conformational switch for multimerization and structural heterogeneity.

Authors:  Stefan Jehle; Breanna S Vollmar; Benjamin Bardiaux; Katja K Dove; Ponni Rajagopal; Tamir Gonen; Hartmut Oschkinat; Rachel E Klevit
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

8.  Assigning large proteins in the solid state: a MAS NMR resonance assignment strategy using selectively and extensively 13C-labelled proteins.

Authors:  Victoria A Higman; Jeremy Flinders; Matthias Hiller; Stefan Jehle; Stefan Markovic; Sebastian Fiedler; Barth-Jan van Rossum; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2009-07-17       Impact factor: 2.835

9.  Structural and functional aspects of hetero-oligomers formed by the small heat shock proteins αB-crystallin and HSP27.

Authors:  J Andrew Aquilina; Sudichhya Shrestha; Amie M Morris; Heath Ecroyd
Journal:  J Biol Chem       Date:  2013-03-26       Impact factor: 5.157

10.  Dynamic subunit exchange and the regulation of microtubule assembly by the stress response protein human alphaB crystallin.

Authors:  Scott A Houck; John I Clark
Journal:  PLoS One       Date:  2010-07-26       Impact factor: 3.240

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