Literature DB >> 17488078

J-deconvolution using maximum entropy reconstruction applied to 13C-13C solid-state cross-polarization magic-angle-spinning NMR of proteins.

Ingo Scholz1, Stefan Jehle, Peter Schmieder, Matthias Hiller, Frank Eisenmenger, Hartmut Oschkinat, Barth-Jan van Rossum.   

Abstract

Scalar couplings between 13C spins can impair both resolution and sensitivity in 13C-labeled preparations. It is demonstrated that deconvolution of magic-angle-spinning NMR data with maximum entropy (MaxEnt) reconstruction allows the removal of splittings due to J-couplings without expenses in sensitivity. A combination of MaxEnt reconstruction in t2 with selective pulses in t1 produces fully J-resolved data in both dimensions. The possibility to obtain J-resolved 13C-13C data without compromising the sensitivity is particularly important for solid-state NMR of "difficult" biological samples, like membrane proteins, where sacrifices in signal-to-noise are fatal. The method is demonstrated using preparations of alpha-spectrin SH3 domain (62 residues) as small test system and of outermembrane protein G as example of a membrane protein with higher molecular weight (281 residues). Both preparations were obtained using [2-13C]-glycerol as the carbon source during the bacterial growth.

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Year:  2007        PMID: 17488078     DOI: 10.1021/ja070849g

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  3 in total

1.  alphaB-crystallin: a hybrid solid-state/solution-state NMR investigation reveals structural aspects of the heterogeneous oligomer.

Authors:  Stefan Jehle; Barth van Rossum; Joseph R Stout; Satoshi M Noguchi; Katja Falber; Kristina Rehbein; Hartmut Oschkinat; Rachel E Klevit; Ponni Rajagopal
Journal:  J Mol Biol       Date:  2008-11-14       Impact factor: 5.469

2.  CH3-specific NMR assignment of alanine, isoleucine, leucine and valine methyl groups in high molecular weight proteins using a single sample.

Authors:  Rime Kerfah; Olivier Hamelin; Jérôme Boisbouvier; Dominique Marion
Journal:  J Biomol NMR       Date:  2015-11-13       Impact factor: 2.835

3.  High-resolution solid-state NMR structure of a 17.6 kDa protein.

Authors:  Ivano Bertini; Anusarka Bhaumik; Gaël De Paëpe; Robert G Griffin; Moreno Lelli; Józef R Lewandowski; Claudio Luchinat
Journal:  J Am Chem Soc       Date:  2010-01-27       Impact factor: 15.419

  3 in total

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