Literature DB >> 19034519

A genetic screen in Saccharomyces cerevisiae identifies new genes that interact with mex67-5, a temperature-sensitive allele of the gene encoding the mRNA export receptor.

Francisco Estruch1, Lorena Peiró-Chova, Natalia Gómez-Navarro, Jordi Durbán, Christine Hodge, Marcellí Del Olmo, Charles N Cole.   

Abstract

The Mex67p protein, together with Mtr2p, functions as the mRNA export receptor in Saccharomyces cerevisiae by interacting with both mRNA and nuclear pore complexes. To identify genes that interact functionally with MEX67, we used transposon insertion to search for mutations that suppressed the temperature-sensitive mex67-5 allele. Four suppressors are described here. The screen revealed that mutant Mex67-5p, but not wild-type Mex67p, is a target of the nuclear protein quality control mediated by San1p, a ubiquitin-protein ligase that participates in degradation of aberrant chromatin-associated proteins. Our finding that overexpression of the SPT6 gene alleviates the growth defects of the mex67-5 strain, together with the impairment of poly(A)(+) RNA export caused by depletion of Spt6p or the related protein Iws1p/Spn1p, supports the mechanism proposed in mammalian cells for Spt6-mediated co-transcriptional loading of mRNA export factors during transcription elongation. Finally, our results also uncovered genetic connections between Mex67p and the poly(A) nuclease complex and with components of chromatin boundary elements.

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Year:  2008        PMID: 19034519     DOI: 10.1007/s00438-008-0402-x

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  50 in total

1.  Defects in the mRNA export factors Rat7p, Gle1p, Mex67p, and Rat8p cause hyperadenylation during 3'-end formation of nascent transcripts.

Authors:  P Hilleren; R Parker
Journal:  RNA       Date:  2001-05       Impact factor: 4.942

2.  Transcription. Histones face the FACT.

Authors:  Jesper Q Svejstrup
Journal:  Science       Date:  2003-08-22       Impact factor: 47.728

3.  The GLFG regions of Nup116p and Nup100p serve as binding sites for both Kap95p and Mex67p at the nuclear pore complex.

Authors:  L A Strawn; T Shen; S R Wente
Journal:  J Biol Chem       Date:  2000-12-04       Impact factor: 5.157

4.  Yeast poly(A)-binding protein, Pab1, and PAN, a poly(A) nuclease complex recruited by Pab1, connect mRNA biogenesis to export.

Authors:  Ewan F Dunn; Christopher M Hammell; Christine A Hodge; Charles N Cole
Journal:  Genes Dev       Date:  2005-01-01       Impact factor: 11.361

5.  The proofreading domain of Escherichia coli DNA polymerase I and other DNA and/or RNA exonuclease domains.

Authors:  M J Moser; W R Holley; A Chatterjee; I S Mian
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  Multiple bromodomain genes are involved in restricting the spread of heterochromatic silencing at the Saccharomyces cerevisiae HMR-tRNA boundary.

Authors:  Nithya Jambunathan; Adam W Martinez; Elizabeth C Robert; Nneamaka B Agochukwu; Megan E Ibos; Sandra L Dugas; David Donze
Journal:  Genetics       Date:  2005-08-03       Impact factor: 4.562

7.  Transcription elongation factors repress transcription initiation from cryptic sites.

Authors:  Craig D Kaplan; Lisa Laprade; Fred Winston
Journal:  Science       Date:  2003-08-22       Impact factor: 47.728

8.  Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C.

Authors:  F Winston; C Dollard; S L Ricupero-Hovasse
Journal:  Yeast       Date:  1995-01       Impact factor: 3.239

9.  Evidence that Spt6p controls chromatin structure by a direct interaction with histones.

Authors:  A Bortvin; F Winston
Journal:  Science       Date:  1996-06-07       Impact factor: 47.728

10.  Proteomic and genomic characterization of chromatin complexes at a boundary.

Authors:  Alan J Tackett; David J Dilworth; Megan J Davey; Michael O'Donnell; John D Aitchison; Michael P Rout; Brian T Chait
Journal:  J Cell Biol       Date:  2005-04-11       Impact factor: 10.539

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  11 in total

1.  Control of chromatin structure by spt6: different consequences in coding and regulatory regions.

Authors:  Iva Ivanovska; Pierre-Étienne Jacques; Oliver J Rando; François Robert; Fred Winston
Journal:  Mol Cell Biol       Date:  2010-11-22       Impact factor: 4.272

Review 2.  Protein quality control in the nucleus.

Authors:  Ramon D Jones; Richard G Gardner
Journal:  Curr Opin Cell Biol       Date:  2016-03-22       Impact factor: 8.382

Review 3.  Selective destruction of abnormal proteins by ubiquitin-mediated protein quality control degradation.

Authors:  Eric K Fredrickson; Richard G Gardner
Journal:  Semin Cell Dev Biol       Date:  2012-01-08       Impact factor: 7.727

Review 4.  Chromatin and transcription in yeast.

Authors:  Oliver J Rando; Fred Winston
Journal:  Genetics       Date:  2012-02       Impact factor: 4.562

5.  Assembly of an export-competent mRNP is needed for efficient release of the 3'-end processing complex after polyadenylation.

Authors:  Xiangping Qu; Søren Lykke-Andersen; Tommy Nasser; Cyril Saguez; Edouard Bertrand; Torben Heick Jensen; Claire Moore
Journal:  Mol Cell Biol       Date:  2009-07-27       Impact factor: 4.272

Review 6.  Cellular maintenance of nuclear protein homeostasis.

Authors:  Pamela S Gallagher; Michelle L Oeser; Ayelet-chen Abraham; Daniel Kaganovich; Richard G Gardner
Journal:  Cell Mol Life Sci       Date:  2013-12-05       Impact factor: 9.261

Review 7.  Regulation of histone gene transcription in yeast.

Authors:  Christoph F Kurat; Judith Recht; Ernest Radovani; Tanja Durbic; Brenda Andrews; Jeffrey Fillingham
Journal:  Cell Mol Life Sci       Date:  2013-08-23       Impact factor: 9.261

8.  Exposed hydrophobicity is a key determinant of nuclear quality control degradation.

Authors:  Eric K Fredrickson; Joel C Rosenbaum; Melissa N Locke; Thomas I Milac; Richard G Gardner
Journal:  Mol Biol Cell       Date:  2011-05-05       Impact factor: 4.138

9.  A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription.

Authors:  Matthew A Sdano; James M Fulcher; Sowmiya Palani; Mahesh B Chandrasekharan; Timothy J Parnell; Frank G Whitby; Tim Formosa; Christopher P Hill
Journal:  Elife       Date:  2017-08-16       Impact factor: 8.140

10.  Sharing the load: Mex67-Mtr2 cofunctions with Los1 in primary tRNA nuclear export.

Authors:  Kunal Chatterjee; Shubhra Majumder; Yao Wan; Vijay Shah; Jingyan Wu; Hsiao-Yun Huang; Anita K Hopper
Journal:  Genes Dev       Date:  2017-12-06       Impact factor: 11.361

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