Literature DB >> 11350039

Defects in the mRNA export factors Rat7p, Gle1p, Mex67p, and Rat8p cause hyperadenylation during 3'-end formation of nascent transcripts.

P Hilleren1, R Parker.   

Abstract

The biosynthesis and function of eukaryotic mRNAs requires a series of events including nuclear polyadenylation, transport to the cytoplasm, translation, and ultimately mRNA degradation. To identify the interrelationships between these events, we examined the synthesis and fate of mRNAs in several strains defective in mRNA export. Strains carrying lesions in RAT7, GLE1, MEX67, and RAT8, produce nascent transcripts carrying poly(A) tails roughly 30 residues longer than the nascent poly(A) tails observed in wild type. In the rat7-1, rat8-2, and mex67-5 strains, the hyperadenylated transcripts undergo a novel form of deadenylation to chase into a population with normal poly(A) tail lengths, which cofractionate with polysomes, undergo nonsense-mediated decay, and are degraded by the normal cytoplasmic decay machinery. This suggests a relationship between the mechanism of processing to a normal poly(A) tail length and the ability of these transcripts to proceed in their metabolism. These observations provide further support for the view that mRNA 3'-end formation and mRNA export are mechanistically coupled events.

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Year:  2001        PMID: 11350039      PMCID: PMC1370127          DOI: 10.1017/s1355838201010147

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  42 in total

1.  A turnover pathway for both stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation.

Authors:  C J Decker; R Parker
Journal:  Genes Dev       Date:  1993-08       Impact factor: 11.361

2.  A small segment of the MAT alpha 1 transcript promotes mRNA decay in Saccharomyces cerevisiae: a stimulatory role for rare codons.

Authors:  G Caponigro; D Muhlrad; R Parker
Journal:  Mol Cell Biol       Date:  1993-09       Impact factor: 4.272

3.  Premature translational termination triggers mRNA decapping.

Authors:  D Muhlrad; R Parker
Journal:  Nature       Date:  1994-08-18       Impact factor: 49.962

4.  Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA.

Authors:  D C Amberg; A L Goldstein; C N Cole
Journal:  Genes Dev       Date:  1992-07       Impact factor: 11.361

5.  Yeast cells lacking 5'-->3' exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5' cap structure.

Authors:  C L Hsu; A Stevens
Journal:  Mol Cell Biol       Date:  1993-08       Impact factor: 4.272

6.  Turnover mechanisms of the stable yeast PGK1 mRNA.

Authors:  D Muhlrad; C J Decker; R Parker
Journal:  Mol Cell Biol       Date:  1995-04       Impact factor: 4.272

7.  Mature mRNA 3' end formation stimulates RNA export from the nucleus.

Authors:  R Eckner; W Ellmeier; M L Birnstiel
Journal:  EMBO J       Date:  1991-11       Impact factor: 11.598

8.  A yeast protein that bidirectionally affects nucleocytoplasmic transport.

Authors:  D R Singleton; S Chen; M Hitomi; C Kumagai; A M Tartakoff
Journal:  J Cell Sci       Date:  1995-01       Impact factor: 5.285

9.  Isolation and characterization of Saccharomyces cerevisiae mRNA transport-defective (mtr) mutants.

Authors:  T Kadowaki; S Chen; M Hitomi; E Jacobs; C Kumagai; S Liang; R Schneiter; D Singleton; J Wisniewska; A M Tartakoff
Journal:  J Cell Biol       Date:  1994-08       Impact factor: 10.539

10.  A conditional allele of the novel repeat-containing yeast nucleoporin RAT7/NUP159 causes both rapid cessation of mRNA export and reversible clustering of nuclear pore complexes.

Authors:  L C Gorsch; T C Dockendorff; C N Cole
Journal:  J Cell Biol       Date:  1995-05       Impact factor: 10.539

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  42 in total

1.  A cis-acting element known to block 3' mRNA degradation enhances expression of polyA-minus mRNA in wild-type yeast cells and phenocopies a ski mutant.

Authors:  J T Brown; A W Johnson
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

2.  Computational modeling of eukaryotic mRNA turnover.

Authors:  D Cao; R Parker
Journal:  RNA       Date:  2001-09       Impact factor: 4.942

3.  A novel function for Sam68: enhancement of HIV-1 RNA 3' end processing.

Authors:  Meredith McLaren; Kengo Asai; Alan Cochrane
Journal:  RNA       Date:  2004-07       Impact factor: 4.942

4.  Viral factors reveal a role for REF/Aly in nuclear RNA stability.

Authors:  Sarah H Stubbs; Olga V Hunter; Ashley Hoover; Nicholas K Conrad
Journal:  Mol Cell Biol       Date:  2012-01-30       Impact factor: 4.272

5.  Nuclear import of cytoplasmic poly(A) binding protein restricts gene expression via hyperadenylation and nuclear retention of mRNA.

Authors:  G Renuka Kumar; Britt A Glaunsinger
Journal:  Mol Cell Biol       Date:  2010-09-07       Impact factor: 4.272

6.  Processing bodies require RNA for assembly and contain nontranslating mRNAs.

Authors:  Daniela Teixeira; Ujwal Sheth; Marco A Valencia-Sanchez; Muriel Brengues; Roy Parker
Journal:  RNA       Date:  2005-02-09       Impact factor: 4.942

7.  Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies.

Authors:  Muriel Brengues; Daniela Teixeira; Roy Parker
Journal:  Science       Date:  2005-09-01       Impact factor: 47.728

8.  Regulation of the Dbp5 ATPase cycle in mRNP remodeling at the nuclear pore: a lively new paradigm for DEAD-box proteins.

Authors:  Sarah Ledoux; Christine Guthrie
Journal:  Genes Dev       Date:  2011-06-01       Impact factor: 11.361

9.  Nuclear pre-mRNA decapping and 5' degradation in yeast require the Lsm2-8p complex.

Authors:  Joanna Kufel; Cecile Bousquet-Antonelli; Jean D Beggs; David Tollervey
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

10.  A conserved CCCH-type zinc finger protein regulates mRNA nuclear adenylation and export.

Authors:  Jessica A Hurt; Robert A Obar; Bo Zhai; Natalie G Farny; Steven P Gygi; Pamela A Silver
Journal:  J Cell Biol       Date:  2009-04-13       Impact factor: 10.539

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