Literature DB >> 19020078

CP1-dependent partitioning of pretransfer and posttransfer editing in leucyl-tRNA synthetase.

Michal T Boniecki1, Michael T Vu, Aswini K Betha, Susan A Martinis.   

Abstract

Mistranslation is toxic to bacterial and mammalian cells and can lead to neurodegeneration in the mouse. Mistranslation is caused by the attachment of the wrong amino acid to a specific tRNA. Many aminoacyl-tRNA synthetases have an editing activity that deacylates the mischarged amino acid before capture by the elongation factor and transport to the ribosome. For class I tRNA synthetases, the editing activity is encoded by the CP1 domain, which is distinct from the active site for aminoacylation. What is not clear is whether the enzymes also have an editing activity that is separable from CP1. A point mutation in CP1 of class I leucyl-tRNA synthetase inactivates deacylase activity and produces misacylated tRNA. In contrast, although deletion of the entire CP1 domain also disabled the deacylase activity, the deletion-bearing enzyme produced no mischarged tRNA. Further investigation showed that a second tRNA-dependent activity prevented misacylation and is intrinsic to the active site for aminoacylation.

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Year:  2008        PMID: 19020078      PMCID: PMC2614743          DOI: 10.1073/pnas.0809336105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  61 in total

1.  Transfer RNA-dependent translocation of misactivated amino acids to prevent errors in protein synthesis.

Authors:  T K Nomanbhoy; T L Hendrickson; P Schimmel
Journal:  Mol Cell       Date:  1999-10       Impact factor: 17.970

2.  Errors from selective disruption of the editing center in a tRNA synthetase.

Authors:  T L Hendrickson; T K Nomanbhoy; P Schimmel
Journal:  Biochemistry       Date:  2000-07-18       Impact factor: 3.162

3.  Blocking site-to-site translocation of a misactivated amino acid by mutation of a class I tRNA synthetase.

Authors:  Anthony C Bishop; Tyzoon K Nomanbhoy; Paul Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-08       Impact factor: 11.205

Review 4.  Aminoacyl-tRNA synthetases: potential markers of genetic code development.

Authors:  L Ribas de Pouplana; P Schimmel
Journal:  Trends Biochem Sci       Date:  2001-10       Impact factor: 13.807

Review 5.  A view into the origin of life: aminoacyl-tRNA synthetases.

Authors:  L Ribas de Pouplana; P Schimmel
Journal:  Cell Mol Life Sci       Date:  2000-06       Impact factor: 9.261

6.  Misacylation and editing by Escherichia coli valyl-tRNA synthetase: evidence for two tRNA binding sites.

Authors:  K D Tardif; M Liu; O Vitseva; Y M Hou; J Horowitz
Journal:  Biochemistry       Date:  2001-07-10       Impact factor: 3.162

7.  Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro.

Authors:  J R Sampson; O C Uhlenbeck
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

8.  Transfer RNA-mediated editing in threonyl-tRNA synthetase. The class II solution to the double discrimination problem.

Authors:  A Dock-Bregeon; R Sankaranarayanan; P Romby; J Caillet; M Springer; B Rees; C S Francklyn; C Ehresmann; D Moras
Journal:  Cell       Date:  2000-12-08       Impact factor: 41.582

9.  Structural basis for double-sieve discrimination of L-valine from L-isoleucine and L-threonine by the complex of tRNA(Val) and valyl-tRNA synthetase.

Authors:  S Fukai; O Nureki; S Sekine; A Shimada; J Tao; D G Vassylyev; S Yokoyama
Journal:  Cell       Date:  2000-11-22       Impact factor: 41.582

10.  The 2 A crystal structure of leucyl-tRNA synthetase and its complex with a leucyl-adenylate analogue.

Authors:  S Cusack; A Yaremchuk; M Tukalo
Journal:  EMBO J       Date:  2000-05-15       Impact factor: 11.598

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  40 in total

1.  Kinetic partitioning between synthetic and editing pathways in class I aminoacyl-tRNA synthetases occurs at both pre-transfer and post-transfer hydrolytic steps.

Authors:  Nevena Cvetesic; John J Perona; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2012-05-30       Impact factor: 5.157

2.  Partitioning of tRNA-dependent editing between pre- and post-transfer pathways in class I aminoacyl-tRNA synthetases.

Authors:  Morana Dulic; Nevena Cvetesic; John J Perona; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

Review 3.  Cellular mechanisms that control mistranslation.

Authors:  Noah M Reynolds; Beth A Lazazzera; Michael Ibba
Journal:  Nat Rev Microbiol       Date:  2010-12       Impact factor: 60.633

4.  Proofreading in translation: dynamics of the double-sieve model.

Authors:  Dino Moras
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-13       Impact factor: 11.205

5.  Aminoacyl transfer rate dictates choice of editing pathway in threonyl-tRNA synthetase.

Authors:  Anand Minajigi; Christopher S Francklyn
Journal:  J Biol Chem       Date:  2010-05-26       Impact factor: 5.157

6.  The mechanism of pre-transfer editing in yeast mitochondrial threonyl-tRNA synthetase.

Authors:  Jiqiang Ling; Kaitlyn M Peterson; Ivana Simonovic; Dieter Söll; Miljan Simonovic
Journal:  J Biol Chem       Date:  2012-07-06       Impact factor: 5.157

7.  Degenerate connective polypeptide 1 (CP1) domain from human mitochondrial leucyl-tRNA synthetase.

Authors:  Qing Ye; Meng Wang; Zhi-Peng Fang; Zhi-Rong Ruan; Quan-Quan Ji; Xiao-Long Zhou; En-Duo Wang
Journal:  J Biol Chem       Date:  2015-08-13       Impact factor: 5.157

8.  Upgrading protein synthesis for synthetic biology.

Authors:  Patrick O'Donoghue; Jiqiang Ling; Yane-Shih Wang; Dieter Söll
Journal:  Nat Chem Biol       Date:  2013-10       Impact factor: 15.040

Review 9.  tRNAs: cellular barcodes for amino acids.

Authors:  Rajat Banerjee; Shawn Chen; Kiley Dare; Marla Gilreath; Mette Praetorius-Ibba; Medha Raina; Noah M Reynolds; Theresa Rogers; Hervé Roy; Srujana S Yadavalli; Michael Ibba
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

10.  The physiological target for LeuRS translational quality control is norvaline.

Authors:  Nevena Cvetesic; Andrés Palencia; Ivan Halasz; Stephen Cusack; Ita Gruic-Sovulj
Journal:  EMBO J       Date:  2014-06-16       Impact factor: 11.598

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