Literature DB >> 10889024

Errors from selective disruption of the editing center in a tRNA synthetase.

T L Hendrickson1, T K Nomanbhoy, P Schimmel.   

Abstract

Some aminoacyl-tRNA synthetases have two catalytic centers that together achieve fine-structure discrimination of closely similar amino acids. The role of tRNA is to stimulate translocation of a misactivated amino acid from the active site to the editing site where the misactivated substrate is eliminated by hydrolysis. Using isoleucyl-tRNA synthetase as an example, we placed mutations in the catalytic center for editing at residues strongly conserved from bacteria to humans. A particular single substitution and one double substitution resulted in production of mischarged tRNA, by interfering specifically with the chemical step of hydrolytic editing. The substitutions affected neither amino acid activation nor aminoacylation, with the cognate amino acid. Thus, because of the demonstrated functional independence of the two catalytic sites, errors of aminoacylation can be generated by selective mutations in the center for editing.

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Year:  2000        PMID: 10889024     DOI: 10.1021/bi0004798

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

Review 1.  Recognizing the D-loop of transfer RNAs.

Authors:  T L Hendrickson
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

2.  Blocking site-to-site translocation of a misactivated amino acid by mutation of a class I tRNA synthetase.

Authors:  Anthony C Bishop; Tyzoon K Nomanbhoy; Paul Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-08       Impact factor: 11.205

3.  Interstice mutations that block site-to-site translocation of a misactivated amino acid bound to a class I tRNA synthetase.

Authors:  Anthony C Bishop; Kirk Beebe; Paul R Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-06       Impact factor: 11.205

4.  Artificially ambiguous genetic code confers growth yield advantage.

Authors:  V Pezo; D Metzgar; T L Hendrickson; W F Waas; S Hazebrouck; V Döring; P Marlière; P Schimmel; V De Crécy-Lagard
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-26       Impact factor: 11.205

5.  Partitioning of tRNA-dependent editing between pre- and post-transfer pathways in class I aminoacyl-tRNA synthetases.

Authors:  Morana Dulic; Nevena Cvetesic; John J Perona; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

6.  Mutational unmasking of a tRNA-dependent pathway for preventing genetic code ambiguity.

Authors:  Amy M Williams; Susan A Martinis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

7.  CP1-dependent partitioning of pretransfer and posttransfer editing in leucyl-tRNA synthetase.

Authors:  Michal T Boniecki; Michael T Vu; Aswini K Betha; Susan A Martinis
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-19       Impact factor: 11.205

8.  An inserted region of leucyl-tRNA synthetase plays a critical role in group I intron splicing.

Authors:  Seung Bae Rho; Tommie L Lincecum; Susan A Martinis
Journal:  EMBO J       Date:  2002-12-16       Impact factor: 11.598

9.  The tRNA A76 Hydroxyl Groups Control Partitioning of the tRNA-dependent Pre- and Post-transfer Editing Pathways in Class I tRNA Synthetase.

Authors:  Nevena Cvetesic; Mirna Bilus; Ita Gruic-Sovulj
Journal:  J Biol Chem       Date:  2015-04-14       Impact factor: 5.157

10.  Discovery of aminoacyl-tRNA synthetase activity through cell-surface display of noncanonical amino acids.

Authors:  A James Link; Mandy K S Vink; Nicholas J Agard; Jennifer A Prescher; Carolyn R Bertozzi; David A Tirrell
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

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