Literature DB >> 19004779

Highly L and D enantioselective variants of horseradish peroxidase discovered by an ultrahigh-throughput selection method.

Eugene Antipov1, Art E Cho, K Dane Wittrup, Alexander M Klibanov.   

Abstract

A highly efficient selection method for enhanced enzyme enantioselectivity based on yeast surface display and fluorescence-activated cell sorting (FACS) is developed and validated. Its application to horseradish peroxidase has resulted in enzyme variants up to 2 orders of magnitude selective toward either substrate enantiomer at will. These marked improvements in enantioselectivity are demonstrated for the surface-bound and soluble enzymes and rationalized by computational docking studies.

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Year:  2008        PMID: 19004779      PMCID: PMC2584688          DOI: 10.1073/pnas.0809851105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

Review 1.  Improving enzymes by using them in organic solvents.

Authors:  A M Klibanov
Journal:  Nature       Date:  2001-01-11       Impact factor: 49.962

Review 2.  Combinatorial and computational challenges for biocatalyst design.

Authors:  F H Arnold
Journal:  Nature       Date:  2001-01-11       Impact factor: 49.962

Review 3.  Milestones in directed enzyme evolution.

Authors:  Haiyan Tao; Virginia W Cornish
Journal:  Curr Opin Chem Biol       Date:  2002-12       Impact factor: 8.822

4.  Controlling the enantioselectivity of enzymes by directed evolution: practical and theoretical ramifications.

Authors:  Manfred T Reetz
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-12       Impact factor: 11.205

Review 5.  Engineered enzymes for improved organic synthesis.

Authors:  Karl Hult; Per Berglund
Journal:  Curr Opin Biotechnol       Date:  2003-08       Impact factor: 9.740

Review 6.  Controlling chirality.

Authors:  Nicholas J Turner
Journal:  Curr Opin Biotechnol       Date:  2003-08       Impact factor: 9.740

7.  The structures of the horseradish peroxidase C-ferulic acid complex and the ternary complex with cyanide suggest how peroxidases oxidize small phenolic substrates.

Authors:  A Henriksen; A T Smith; M Gajhede
Journal:  J Biol Chem       Date:  1999-12-03       Impact factor: 5.157

8.  Functional expression and stabilization of horseradish peroxidase by directed evolution in Saccharomyces cerevisiae.

Authors:  B Morawski; S Quan; F H Arnold
Journal:  Biotechnol Bioeng       Date:  2001-09       Impact factor: 4.530

9.  Directed evolution of epoxide hydrolase from A. radiobacter toward higher enantioselectivity by error-prone PCR and DNA shuffling.

Authors:  Bert van Loo; Jeffrey H Lutje Spelberg; Jaap Kingma; Theo Sonke; Marcel G Wubbolts; Dick B Janssen
Journal:  Chem Biol       Date:  2004-07

Review 10.  Horseradish peroxidase: a modern view of a classic enzyme.

Authors:  Nigel C Veitch
Journal:  Phytochemistry       Date:  2004-02       Impact factor: 4.072

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  16 in total

1.  Yeast display evolution of a kinetically efficient 13-amino acid substrate for lipoic acid ligase.

Authors:  Sujiet Puthenveetil; Daniel S Liu; Katharine A White; Samuel Thompson; Alice Y Ting
Journal:  J Am Chem Soc       Date:  2009-11-18       Impact factor: 15.419

2.  A general strategy for the evolution of bond-forming enzymes using yeast display.

Authors:  Irwin Chen; Brent M Dorr; David R Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-22       Impact factor: 11.205

3.  Ultrahigh-throughput screening in drop-based microfluidics for directed evolution.

Authors:  Jeremy J Agresti; Eugene Antipov; Adam R Abate; Keunho Ahn; Amy C Rowat; Jean-Christophe Baret; Manuel Marquez; Alexander M Klibanov; Andrew D Griffiths; David A Weitz
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-08       Impact factor: 11.205

4.  Coupling Binding to Catalysis: Using Yeast Cell Surface Display to Select Enzymatic Activities.

Authors:  Keya Zhang; Karan Bhuripanyo; Yiyang Wang; Jun Yin
Journal:  Methods Mol Biol       Date:  2015

Review 5.  Applications of Yeast Surface Display for Protein Engineering.

Authors:  Gerald M Cherf; Jennifer R Cochran
Journal:  Methods Mol Biol       Date:  2015

6.  Determinants of BH3 binding specificity for Mcl-1 versus Bcl-xL.

Authors:  Sanjib Dutta; Stefano Gullá; T Scott Chen; Emiko Fire; Robert A Grant; Amy E Keating
Journal:  J Mol Biol       Date:  2010-04-02       Impact factor: 5.469

7.  Assessing directed evolution methods for the generation of biosynthetic enzymes with potential in drug biosynthesis.

Authors:  David P Nannemann; William R Birmingham; Robert A Scism; Brian O Bachmann
Journal:  Future Med Chem       Date:  2011-05       Impact factor: 3.808

8.  High-throughput screening of microchip-synthesized genes in programmable double-emulsion droplets.

Authors:  H F Chan; S Ma; J Tian; K W Leong
Journal:  Nanoscale       Date:  2017-03-09       Impact factor: 7.790

9.  How a single-point mutation in horseradish peroxidase markedly enhances enantioselectivity.

Authors:  Eugene Antipov; Art E Cho; Alexander M Klibanov
Journal:  J Am Chem Soc       Date:  2009-08-12       Impact factor: 15.419

10.  Engineering Novel and Improved Biocatalysts by Cell Surface Display.

Authors:  Mason R Smith; Eshita Khera; Fei Wen
Journal:  Ind Eng Chem Res       Date:  2015-01-20       Impact factor: 3.720

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