Literature DB >> 19001293

Extensions of the coalescent effective population size.

John Wakeley1, Ori Sargsyan.   

Abstract

We suggest two extensions of the coalescent effective population size of Sjödin et al. (2005) and make a third, practical point. First, to bolster its relevance to data and allow comparisons between models, the coalescent effective size should be recast as a kind of mutation effective size. Second, the requirement that the coalescent effective population size must depend linearly on the actual population size should be lifted. Third, even if the coalescent effective population size does not exist in the mathematical sense, it may be difficult to reject Kingman's coalescent using genetic data.

Mesh:

Year:  2008        PMID: 19001293      PMCID: PMC2621185          DOI: 10.1534/genetics.108.092460

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  14 in total

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Authors:  John R Pannell
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Authors:  P Sjödin; I Kaj; S Krone; M Lascoux; M Nordborg
Journal:  Genetics       Date:  2004-10-16       Impact factor: 4.562

6.  Genetic variability and effective population size when local extinction and recolonization of subpopulations are frequent.

Authors:  T Maruyama; M Kimura
Journal:  Proc Natl Acad Sci U S A       Date:  1980-11       Impact factor: 11.205

7.  A note on effective population size with overlapping generations.

Authors:  W G Hill
Journal:  Genetics       Date:  1979-05       Impact factor: 4.562

8.  The effective size of a subdivided population.

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Journal:  Genetics       Date:  1997-05       Impact factor: 4.562

9.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Authors:  F Tajima
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

10.  Evolutionary relationship of DNA sequences in finite populations.

Authors:  F Tajima
Journal:  Genetics       Date:  1983-10       Impact factor: 4.562

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  25 in total

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8.  On the eigenvalue effective size of structured populations.

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Journal:  J Math Biol       Date:  2014-09-18       Impact factor: 2.259

9.  Viral phylodynamics and the search for an 'effective number of infections'.

Authors:  Simon D W Frost; Erik M Volz
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-06-27       Impact factor: 6.237

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