Literature DB >> 18983934

How a cyanobacterium tells time.

Guogang Dong1, Susan S Golden.   

Abstract

The cyanobacterium Synechococcus elongatus builds a circadian clock on an oscillator composed of three proteins, KaiA, KaiB, and KaiC, which can recapitulate a circadian rhythm of KaiC phosphorylation in vitro. The molecular structures of all three proteins are known, and the phosphorylation steps of KaiC, the interaction dynamics among the three Kai proteins, and a weak ATPase activity of KaiC have all been characterized. An input pathway of redox-sensitive proteins uses photosynthetic function to relay light/dark information to the oscillator, and signal transduction proteins of well-known families broadcast temporal information to the genome, where global changes in transcription and a compaction of the chromosome are clock regulated.

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Year:  2008        PMID: 18983934      PMCID: PMC2692899          DOI: 10.1016/j.mib.2008.10.003

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  54 in total

Review 1.  Circadian programming in cyanobacteria.

Authors:  T Mori; C H Johnson
Journal:  Semin Cell Dev Biol       Date:  2001-08       Impact factor: 7.727

2.  Biochemical properties of CikA, an unusual phytochrome-like histidine protein kinase that resets the circadian clock in Synechococcus elongatus PCC 7942.

Authors:  Michinori Mutsuda; Klaus-Peter Michel; Xiaofan Zhang; Beronda L Montgomery; Susan S Golden
Journal:  J Biol Chem       Date:  2003-03-07       Impact factor: 5.157

3.  Circadian clock protein KaiC forms ATP-dependent hexameric rings and binds DNA.

Authors:  Tetsuya Mori; Sergei V Saveliev; Yao Xu; Walter F Stafford; Michael M Cox; Ross B Inman; Carl H Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

4.  KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria.

Authors:  Hideo Iwasaki; Taeko Nishiwaki; Yohko Kitayama; Masato Nakajima; Takao Kondo
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-21       Impact factor: 11.205

5.  Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC.

Authors:  Yao Xu; Tetsuya Mori; Carl Hirschie Johnson
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

6.  KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system.

Authors:  Yohko Kitayama; Hideo Iwasaki; Taeko Nishiwaki; Takao Kondo
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

7.  Global gene repression by KaiC as a master process of prokaryotic circadian system.

Authors:  Yoichi Nakahira; Mitsunori Katayama; Hiroshi Miyashita; Shinsuke Kutsuna; Hideo Iwasaki; Tokitaka Oyama; Takao Kondo
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-06       Impact factor: 11.205

8.  Circadian formation of clock protein complexes by KaiA, KaiB, KaiC, and SasA in cyanobacteria.

Authors:  Hakuto Kageyama; Takao Kondo; Hideo Iwasaki
Journal:  J Biol Chem       Date:  2002-11-18       Impact factor: 5.157

9.  Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC.

Authors:  Robert G Garces; Ning Wu; Wanda Gillon; Emil F Pai
Journal:  EMBO J       Date:  2004-04-08       Impact factor: 11.598

10.  Phase determination of circadian gene expression in Synechococcus elongatus PCC 7942.

Authors:  Hongtao Min; Yi Liu; Carl H Johnson; Susan S Golden
Journal:  J Biol Rhythms       Date:  2004-04       Impact factor: 3.182

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  43 in total

1.  Synchronization and entrainment of coupled circadian oscillators.

Authors:  N Komin; A C Murza; E Hernández-García; R Toral
Journal:  Interface Focus       Date:  2010-10-13       Impact factor: 3.906

2.  Chlamydomonas reinhardtii: duration of its cell cycle and phases at growth rates affected by light intensity.

Authors:  Milada Vítová; Kateřina Bišová; Dáša Umysová; Monika Hlavová; Shigeyuki Kawano; Vilém Zachleder; Mária Cížková
Journal:  Planta       Date:  2010-10-05       Impact factor: 4.116

3.  Effects of deficiency and overdose of group 2 sigma factors in triple inactivation strains of Synechocystis sp. strain PCC 6803.

Authors:  Maija Pollari; Susanne Rantamäki; Tuomas Huokko; Anna Kårlund-Marttila; Virpi Virjamo; Esa Tyystjärvi; Taina Tyystjärvi
Journal:  J Bacteriol       Date:  2010-10-22       Impact factor: 3.490

4.  Biochemical evidence for a timing mechanism in prochlorococcus.

Authors:  Ilka M Axmann; Ulf Dühring; Luiza Seeliger; Anne Arnold; Jens T Vanselow; Achim Kramer; Annegret Wilde
Journal:  J Bacteriol       Date:  2009-06-05       Impact factor: 3.490

5.  Dynamics simulations for engineering macromolecular interactions.

Authors:  Avi Robinson-Mosher; Tamar Shinar; Pamela A Silver; Jeffrey Way
Journal:  Chaos       Date:  2013-06       Impact factor: 3.642

6.  The rolex and the hourglass: a simplified circadian clock in prochlorococcus?

Authors:  Conrad W Mullineaux; Ralf Stanewsky
Journal:  J Bacteriol       Date:  2009-06-26       Impact factor: 3.490

Review 7.  The molecular clockwork of a protein-based circadian oscillator.

Authors:  Joseph S Markson; Erin K O'Shea
Journal:  FEBS Lett       Date:  2009-12-17       Impact factor: 4.124

Review 8.  Understanding systems-level properties: timely stories from the study of clocks.

Authors:  John B Hogenesch; Hiroki R Ueda
Journal:  Nat Rev Genet       Date:  2011-05-10       Impact factor: 53.242

Review 9.  Temporal and spatial oscillations in bacteria.

Authors:  Peter Lenz; Lotte Søgaard-Andersen
Journal:  Nat Rev Microbiol       Date:  2011-08-15       Impact factor: 60.633

10.  Effect of continuous light on diurnal rhythms in Cyanothece sp. ATCC 51142.

Authors:  Thanura Elvitigala; Jana Stöckel; Bijoy K Ghosh; Himadri B Pakrasi
Journal:  BMC Genomics       Date:  2009-05-15       Impact factor: 3.969

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