Literature DB >> 18974739

Calibrating excitation light fluxes for quantitative light microscopy in cell biology.

David Grünwald1, Shailesh M Shenoy, Sean Burke, Robert H Singer.   

Abstract

Power output of light bulbs changes over time and the total energy delivered will depend on the optical beam path of the microscope, filter sets and objectives used, thus making comparison between experiments performed on different microscopes complicated. Using a thermocoupled power meter, it is possible to measure the exact amount of light applied to a specimen in fluorescence microscopy, regardless of the light source, as the light power measured can be translated into a power density at the sample. This widely used and simple tool forms the basis of a new degree of calibration precision and comparability of results among experiments and setups. Here we describe an easy-to-follow protocol that allows researchers to precisely estimate excitation intensities in the object plane, using commercially available opto-mechanical components. The total duration of this protocol for one objective and six filter cubes is 75 min including start-up time for the lamp.

Mesh:

Year:  2008        PMID: 18974739      PMCID: PMC3109976          DOI: 10.1038/nprot.2008.180

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  9 in total

1.  Single mRNA molecules demonstrate probabilistic movement in living mammalian cells.

Authors:  Dahlene Fusco; Nathalie Accornero; Brigitte Lavoie; Shailesh M Shenoy; Jean-Marie Blanchard; Robert H Singer; Edouard Bertrand
Journal:  Curr Biol       Date:  2003-01-21       Impact factor: 10.834

2.  Image calibration in fluorescence microscopy.

Authors:  J M Zwier; G J Van Rooij; J W Hofstraat; G J Brakenhoff
Journal:  J Microsc       Date:  2004-10       Impact factor: 1.758

3.  Calibration and standardization of the emission light path of confocal microscopes.

Authors:  E H Cho; S J Lockett
Journal:  J Microsc       Date:  2006-07       Impact factor: 1.758

4.  Intensity calibration of a laser scanning confocal microscope based on concentrated dyes.

Authors:  Michael A Model; James L Blank
Journal:  Anal Quant Cytol Histol       Date:  2006-10       Impact factor: 0.302

5.  Direct observation of single protein molecules in aqueous solution.

Authors:  David Grünwald; Andreas Hoekstra; Thomas Dange; Volker Buschmann; Ulrich Kubitscheck
Journal:  Chemphyschem       Date:  2006-04-10       Impact factor: 3.102

6.  Improving the photostability of bright monomeric orange and red fluorescent proteins.

Authors:  Nathan C Shaner; Michael Z Lin; Michael R McKeown; Paul A Steinbach; Kristin L Hazelwood; Michael W Davidson; Roger Y Tsien
Journal:  Nat Methods       Date:  2008-05-04       Impact factor: 28.547

7.  A LED light calibration source for dual-wavelength microscopy.

Authors:  J M Beach
Journal:  Cell Calcium       Date:  1997-01       Impact factor: 6.817

8.  Nuclear transport of single molecules: dwell times at the nuclear pore complex.

Authors:  Ulrich Kubitscheck; David Grünwald; Andreas Hoekstra; Daniel Rohleder; Thorsten Kues; Jan Peter Siebrasse; Reiner Peters
Journal:  J Cell Biol       Date:  2005-01-17       Impact factor: 10.539

9.  Evaluating performance in three-dimensional fluorescence microscopy.

Authors:  John M Murray; Paul L Appleton; Jason R Swedlow; Jennifer C Waters
Journal:  J Microsc       Date:  2007-12       Impact factor: 1.758

  9 in total
  11 in total

1.  A metric and workflow for quality control in the analysis of heterogeneity in phenotypic profiles and screens.

Authors:  Albert Gough; Tong Ying Shun; D Lansing Taylor; Mark Schurdak
Journal:  Methods       Date:  2015-11-04       Impact factor: 3.608

2.  A novel role of vimentin filaments: binding and stabilization of collagen mRNAs.

Authors:  Azariyas A Challa; Branko Stefanovic
Journal:  Mol Cell Biol       Date:  2011-07-11       Impact factor: 4.272

3.  Evaluating the performance of time-gated live-cell microscopy with lanthanide probes.

Authors:  Megha Rajendran; Lawrence W Miller
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

Review 4.  Single molecule fluorescence approaches shed light on intracellular RNAs.

Authors:  Sethuramasundaram Pitchiaya; Laurie A Heinicke; Thomas C Custer; Nils G Walter
Journal:  Chem Rev       Date:  2014-01-08       Impact factor: 60.622

5.  Time-resolved microscopy for imaging lanthanide luminescence in living cells.

Authors:  Nivriti Gahlaut; Lawrence W Miller
Journal:  Cytometry A       Date:  2010-09-07       Impact factor: 4.355

Review 6.  Recent advances in the standardization of fluorescence microscopy for quantitative image analysis.

Authors:  Akira Sasaki
Journal:  Biophys Rev       Date:  2021-11-16

Review 7.  A perspective of the dynamic structure of the nucleus explored at the single-molecule level.

Authors:  Thomas Dange; Aviva Joseph; David Grünwald
Journal:  Chromosome Res       Date:  2011-01       Impact factor: 5.239

8.  Slow unloading leads to DNA-bound β2-sliding clamp accumulation in live Escherichia coli cells.

Authors:  M Charl Moolman; Sriram Tiruvadi Krishnan; Jacob W J Kerssemakers; Aafke van den Berg; Pawel Tulinski; Martin Depken; Rodrigo Reyes-Lamothe; David J Sherratt; Nynke H Dekker
Journal:  Nat Commun       Date:  2014-12-18       Impact factor: 14.919

9.  Biophysical constraints of optogenetic inhibition at presynaptic terminals.

Authors:  Mathias Mahn; Matthias Prigge; Shiri Ron; Rivka Levy; Ofer Yizhar
Journal:  Nat Neurosci       Date:  2016-03-07       Impact factor: 24.884

10.  High-efficiency optogenetic silencing with soma-targeted anion-conducting channelrhodopsins.

Authors:  Mathias Mahn; Lihi Gibor; Pritish Patil; Katayun Cohen-Kashi Malina; Shir Oring; Yoav Printz; Rivka Levy; Ilan Lampl; Ofer Yizhar
Journal:  Nat Commun       Date:  2018-10-08       Impact factor: 14.919

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.