Literature DB >> 18940696

Genome-wide association studies in neurological disorders.

Javier Simón-Sánchez1, Andrew Singleton.   

Abstract

BACKGROUND: During the past decade, the genetic causes of monogenic forms of disease have been successfully defined; this work has helped the progression of basic scientific investigation into many disorders, and has helped to characterise several molecular biological processes. An important goal of genetic research is to extend this work and define genetic risk factor loci for complex disorders. The aim is for these data not only to offer further basic understanding of the disease process, but also to provide the opportunity to obtain genetic risk assessments that could be generalised to the public. RECENT DEVELOPMENTS: The development of resources such as the Human Genome Project and the International Human Haplotype Map Project, coupled with technological advances in ultra-high-throughput genotyping, have provided the basis for genome-wide association studies (GWAS). This approach has been successful for several complex disorders in a short time. Although GWAS are still a new method, these studies have been used for a small number of neurological disorders and, despite varied results for these conditions, GWAS can usefully show the power and limitations of this approach. WHERE NEXT?: GWAS have the potential to show and emphasise common genetic variability associated with disease. However, a challenge of this approach is that large sample series and considerable resources are required. One important consideration will be the interpretation of the results of GWAS in a clinically meaningful way and to discern the implications for all therapy areas, including neurological disorders; this challenge will require specialised skills and resources from both the medical and the scientific communities.

Entities:  

Mesh:

Year:  2008        PMID: 18940696      PMCID: PMC2824165          DOI: 10.1016/S1474-4422(08)70241-2

Source DB:  PubMed          Journal:  Lancet Neurol        ISSN: 1474-4422            Impact factor:   44.182


  28 in total

Review 1.  Genome-wide association studies: theoretical and practical concerns.

Authors:  William Y S Wang; Bryan J Barratt; David G Clayton; John A Todd
Journal:  Nat Rev Genet       Date:  2005-02       Impact factor: 53.242

2.  No evidence for association with Parkinson disease for 13 single-nucleotide polymorphisms identified by whole-genome association screening.

Authors:  A Goris; C H Williams-Gray; T Foltynie; D A S Compston; R A Barker; S J Sawcer
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3.  High-resolution whole-genome association study of Parkinson disease.

Authors:  Demetrius M Maraganore; Mariza de Andrade; Timothy G Lesnick; Kari J Strain; Matthew J Farrer; Walter A Rocca; P V Krishna Pant; Kelly A Frazer; David R Cox; Dennis G Ballinger
Journal:  Am J Hum Genet       Date:  2005-09-09       Impact factor: 11.025

Review 4.  Genetic dissection of the common epilepsies.

Authors:  Nigel C K Tan; John C Mulley; Ingrid E Scheffer
Journal:  Curr Opin Neurol       Date:  2006-04       Impact factor: 5.710

5.  Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels.

Authors:  Richa Saxena; Benjamin F Voight; Valeriya Lyssenko; Noël P Burtt; Paul I W de Bakker; Hong Chen; Jeffrey J Roix; Sekar Kathiresan; Joel N Hirschhorn; Mark J Daly; Thomas E Hughes; Leif Groop; David Altshuler; Peter Almgren; Jose C Florez; Joanne Meyer; Kristin Ardlie; Kristina Bengtsson Boström; Bo Isomaa; Guillaume Lettre; Ulf Lindblad; Helen N Lyon; Olle Melander; Christopher Newton-Cheh; Peter Nilsson; Marju Orho-Melander; Lennart Råstam; Elizabeth K Speliotes; Marja-Riitta Taskinen; Tiinamaija Tuomi; Candace Guiducci; Anna Berglund; Joyce Carlson; Lauren Gianniny; Rachel Hackett; Liselotte Hall; Johan Holmkvist; Esa Laurila; Marketa Sjögren; Maria Sterner; Aarti Surti; Margareta Svensson; Malin Svensson; Ryan Tewhey; Brendan Blumenstiel; Melissa Parkin; Matthew Defelice; Rachel Barry; Wendy Brodeur; Jody Camarata; Nancy Chia; Mary Fava; John Gibbons; Bob Handsaker; Claire Healy; Kieu Nguyen; Casey Gates; Carrie Sougnez; Diane Gage; Marcia Nizzari; Stacey B Gabriel; Gung-Wei Chirn; Qicheng Ma; Hemang Parikh; Delwood Richardson; Darrell Ricke; Shaun Purcell
Journal:  Science       Date:  2007-04-26       Impact factor: 47.728

6.  A genome-wide genotyping study in patients with ischaemic stroke: initial analysis and data release.

Authors:  Mar Matarín; W Mark Brown; Sonja Scholz; Javier Simón-Sánchez; Hon-Chung Fung; Dena Hernandez; J Raphael Gibbs; Fabienne Wavrant De Vrieze; Cynthia Crews; Angela Britton; Carl D Langefeld; Thomas G Brott; Robert D Brown; Bradford B Worrall; Michael Frankel; Scott Silliman; L Douglas Case; Andrew Singleton; John A Hardy; Stephen S Rich; James F Meschia
Journal:  Lancet Neurol       Date:  2007-05       Impact factor: 44.182

7.  Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data.

Authors:  Hon-Chung Fung; Sonja Scholz; Mar Matarin; Javier Simón-Sánchez; Dena Hernandez; Angela Britton; J Raphael Gibbs; Carl Langefeld; Matt L Stiegert; Jennifer Schymick; Michael S Okun; Ronald J Mandel; Hubert H Fernandez; Kelly D Foote; Ramón L Rodríguez; Elizabeth Peckham; Fabienne Wavrant De Vrieze; Katrina Gwinn-Hardy; John A Hardy; Andrew Singleton
Journal:  Lancet Neurol       Date:  2006-11       Impact factor: 44.182

8.  Refining genetic associations in multiple sclerosis.

Authors: 
Journal:  Lancet Neurol       Date:  2008-07       Impact factor: 44.182

9.  A high-density whole-genome association study reveals that APOE is the major susceptibility gene for sporadic late-onset Alzheimer's disease.

Authors:  Keith D Coon; Amanda J Myers; David W Craig; Jennifer A Webster; John V Pearson; Diane Hu Lince; Victoria L Zismann; Thomas G Beach; Doris Leung; Leslie Bryden; Rebecca F Halperin; Lauren Marlowe; Mona Kaleem; Douglas G Walker; Rivka Ravid; Christopher B Heward; Joseph Rogers; Andreas Papassotiropoulos; Eric M Reiman; John Hardy; Dietrich A Stephan
Journal:  J Clin Psychiatry       Date:  2007-04       Impact factor: 4.384

10.  Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data.

Authors:  Jennifer C Schymick; Sonja W Scholz; Hon-Chung Fung; Angela Britton; Sampath Arepalli; J Raphael Gibbs; Federica Lombardo; Mar Matarin; Dalia Kasperaviciute; Dena G Hernandez; Cynthia Crews; Lucie Bruijn; Jeffrey Rothstein; Gabriele Mora; Gabriella Restagno; Adriano Chiò; Andrew Singleton; John Hardy; Bryan J Traynor
Journal:  Lancet Neurol       Date:  2007-04       Impact factor: 44.182

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  24 in total

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Review 2.  The era of genomic epidemiology.

Authors:  Bryan J Traynor
Journal:  Neuroepidemiology       Date:  2009-08-20       Impact factor: 3.282

Review 3.  Application of next-generation sequencing technologies in Neurology.

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4.  Cbl-b-deficient mice express alterations in trafficking-related molecules but retain sensitivity to the multiple sclerosis therapeutic agent, FTY720.

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Review 5.  Long non-coding RNAs in nervous system function and disease.

Authors:  Irfan A Qureshi; John S Mattick; Mark F Mehler
Journal:  Brain Res       Date:  2010-04-07       Impact factor: 3.252

Review 6.  The Advantages and Challenges of Diversity in Pharmacogenomics: Can Minority Populations Bring Us Closer to Implementation?

Authors:  Honghong Zhang; Tanima De; Yizhen Zhong; Minoli A Perera
Journal:  Clin Pharmacol Ther       Date:  2019-08       Impact factor: 6.875

Review 7.  Genome-wide association studies in Africans and African Americans: expanding the framework of the genomics of human traits and disease.

Authors:  Emmanuel Peprah; Huichun Xu; Fasil Tekola-Ayele; Charmaine D Royal
Journal:  Public Health Genomics       Date:  2014-11-26       Impact factor: 2.000

8.  Effectiveness of a web-based protocol for the screening and phenotyping of individuals with Tourette syndrome for genetic studies.

Authors:  Crystelle A Egan; Susan E Marakovitz; Julia A O'Rourke; Lisa Osiecki; Cornelia Illmann; Lauren Barton; Elizabeth McLaughlin; Rachel Proujansky; Justin Royal; Heather Cowley; Martha Rangel-Lugo; David L Pauls; Jeremiah M Scharf; Carol A Mathews
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2012-10-22       Impact factor: 3.568

Review 9.  Pathways to neurodegeneration: mechanistic insights from GWAS in Alzheimer's disease, Parkinson's disease, and related disorders.

Authors:  Vijay K Ramanan; Andrew J Saykin
Journal:  Am J Neurodegener Dis       Date:  2013-09-18

10.  Varietas: a functional variation database portal.

Authors:  Jussi Paananen; Robert Ciszek; Garry Wong
Journal:  Database (Oxford)       Date:  2010-07-29       Impact factor: 3.451

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